| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2799 |
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| Symbol | yibK |
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| ID | 6988347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3031372 |
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| End bp | 3031851 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643381078 |
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| Product | hypothetical tRNA/rRNA methyltransferase |
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| Protein accession | YP_002264135 |
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| Protein GI | 209696205 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.100203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGAAA TTGCACTATA CGAACCTGAA ATTGCACCAA ATACAGGTAA CATTATTCGT
TTGTCTGCGA ACTGCGGTGC CAACTTGCAC TTAATTGAAC CATTAGGTTT TGATCTAGAA
GAAAAAAAAT TACGCCGAGC AGGATTGGAC TACCACGATT TAGCTCATGT AAAACGCCAT
AAAGATTATG CGGCGTTTCT TGATTACTTA GAAAATGAAA GTGAAGGCGA GCACCGTATT
TTTGCTTGTA CTACCAAAAC AACAGGTCAC CATACGACAC CAAGCTATCA AAAAGGGGAC
GTTCTATTGT TTGGTCCTGA GACGCGTGGT TTACCCGCAG AGTTAATTGA AGGCTTACCA
ATGGAGCAAC GTGTTCGTAT ACCTATGATG GCAGACAGTC GCAGTTTGAA CTTATCAAAC
TCAGTGGCCA TCATCGTGTT TGAAGCATGG CGTCAAATGG GCTTTGAAGG CGGACTATAG
|
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| Protein sequence | MFEIALYEPE IAPNTGNIIR LSANCGANLH LIEPLGFDLE EKKLRRAGLD YHDLAHVKRH
KDYAAFLDYL ENESEGEHRI FACTTKTTGH HTTPSYQKGD VLLFGPETRG LPAELIEGLP
MEQRVRIPMM ADSRSLNLSN SVAIIVFEAW RQMGFEGGL
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