Gene VSAL_I2792 details

Gene Information

• Locus tag: VSAL_I2792
• Symbol: efp
• ID: 6988562
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 3024543
• End bp: 3025109
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643381071
• Product: elongation factor P
• Protein accession: YP_002264128
• Protein GI: 209696198
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00038] translation elongation factor P

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00201072
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGTCAG TAAGTACCAA TGAATTCAAA GGCGGTTTGA AATTTATGTT TGATAACGAG 
CCATGCTCAA TTATCGACAA TGAATATGTT AAACCTGGTA AAGGCCAAGC ATTCAACCGT 
GTAAAACTTC GCAAATTGCT TTCTGGTAAA ACACTAGAAA AAACATTTAA ATCAGGTGAA 
AGCTTTGAGC TTGCTGATGT TGTCGACGTA GAACTTGACT ACTTGTACAG CGATGGCGAA 
TTCTTCCATT TCATGAACAG CGTAAGCTTT GAGCAAATCG CTGCTGATGT TAAATCGGTT 
GGTGACACGG CTAAATGGTT AGTAGAAAAC AACACTTGTA CTGTGACTCT TTGGAATGAT 
AATCCAATTA CAGTGACACC GCCAAACTTT GTTGAGATTG AAGTGACTGA AACAGATCCT 
GGTCTGAAAG GTGATACTCA AGGTACTGGT GGTAAACCAG CTACATTAGC AACAGGCGCT 
GTTGTTCGTG TTCCGCTATT CATCGCTATC GGTGAAGTAG TTAAAGTTGA TACCCGTACG 
GGTGAATACG TAGGTCGTGT GAAGTAA 

 

Protein sequence

MASVSTNEFK GGLKFMFDNE PCSIIDNEYV KPGKGQAFNR VKLRKLLSGK TLEKTFKSGE 
SFELADVVDV ELDYLYSDGE FFHFMNSVSF EQIAADVKSV GDTAKWLVEN NTCTVTLWND 
NPITVTPPNF VEIEVTETDP GLKGDTQGTG GKPATLATGA VVRVPLFIAI GEVVKVDTRT 
GEYVGRVK