| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2790 |
|---|
| Symbol | frdC |
|---|
| ID | 6988560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 3023594 |
|---|
| End bp | 3023977 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643381069 |
|---|
| Product | fumarate reductase subunit C |
|---|
| Protein accession | YP_002264126 |
|---|
| Protein GI | 209696196 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3029] Fumarate reductase subunit C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.193759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC GTAAACCTTA CGTTCGCGAA ATGACACGTA CGTGGTGGAA AGATCACCCT
TTCTACCGTT TTTACATGGT GCGTGAAGCA ACCATTCTTC CATTGATTTT CTTTACTATC
TGTCTGCTTG TTGGTTTAGG TAGTTTAGTA AAAGGTCCAC TGGCTTGGGC TTCATGGTTA
GATTTCATGG CAAACCCTAT TGTGGTTGCT TTGAACATTG TTGCTTTAGC GGGTAGCTTA
TTCCATGCTC AAACTTTCTT TAGCATGATG CCGCAAGTAA TGCCGATTCG TCTGGGTGGT
AAAACACTAG ATAAAAAAGT GGTTGTGCTT GCACAATGGG CTGCAGTTGC AGCAATTACA
TTACTTGTAT TGGTTATCGT TTAA
|
|---|
| Protein sequence | MSNRKPYVRE MTRTWWKDHP FYRFYMVREA TILPLIFFTI CLLVGLGSLV KGPLAWASWL
DFMANPIVVA LNIVALAGSL FHAQTFFSMM PQVMPIRLGG KTLDKKVVVL AQWAAVAAIT
LLVLVIV
|
|---|
| |