Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2776 |
Symbol | hflX |
ID | 6988655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 3005754 |
End bp | 3007073 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643381045 |
Product | putative GTPase HflX |
Protein accession | YP_002264112 |
Protein GI | 209696182 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.114582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTTTGACC GTTATGAATC CGGTGAACAG GCTATTCTTG TGCACATCAG CTTTACTTAT GAAGGGGAGT TGGAAGATCT CAACGAGTGT AAAATGTTGA TATCTTCTGC TGGAGCCAAC ACATTAGGTG TTGTGACGGG GACCCGTCAA TCTCCGCTCC CTAAATATTA TGTTGGTTTA GGTAAAGCAC AAGAAATTGC CAATATGGTT CGAGCTAAGA ATGCGGATAT TGTGATTTTT AATCATGCGC TTTCTCCTGC TCAAGAACGA AATTTAGAGG CATTATGTGA ATGTCGAGTG ATAGACCGTA ATGGGTTAAT ACTGGATATT TTTGCTCAAC GTGCACGAAC CTATGAAGGT AAGTTGCAAG TCGAGCTCGC ACAATTACGT CATATATCTA CTCGATTGAT CCGAGGATGG ACACACCTTG AACGCCAAAA AGGCGGGATT GGTTTACGTG GTCCTGGTGA AACTCAGTTG GAAAGCGATA GACGATTATT ACGAGATCGT ATTAAAGCAA TTCAACGTCG ATTGGCTAAA GTCGCAAAAC AACGCGAACA AGGTCGTCGG GCAAGATATC GTGCAGAAAT CCCAACCATT TCTTTAGTTG GTTATACTAA CGCAGGTAAA TCTACGTTAT TTAATCGAAT TACAGATGCG GGGGTTTATG CCGCTGACCA GCTGTTTGCT ACGCTTGATC CTACATTACG TAAGATAGAC GTTACAGATG TTGGTACAGC AATACTTGCT GATACGGTGG GCTTTATACG TCATTTACCT CATGATCTTG TTGCCGCGTT TAAAGCGACA CTTCAAGAAA CGCAAGAAGC AAATATCTTG TTACATGTTG TTGATGCCAG TGATGAACGC TTTCGTGAGA ACATTGAAGC GGTAGATATT GTTCTAGAAG AGATAGATGC CAATGAGGTA CCTTATCTTC TCGTAATGAA TAAGATTGAT GACTTAGAAG ATCAACAACC ACGAATTGAC CGTGATGAAG AGGGCGTTCC TCGATGTGTT TGGGTTTCAG CAATGGAAGG CGAAGGCATT GATTTACTTT TTCAAGCATT AACGGAGCGA TTAGCAGGGC AGATGGTAGA GCATACATTG CGGTTACCTC CTGAATTGGT TGGGCGTTTT CGAAGTAAAT TCTTTCAAAT GCAAAGCATT ATAAAAGAAG AATATCAGGA TGATGGCAGC TTGCTTATTG ATATACGTAT GCAGCAAGTT GATTGGTCTA AGTTAGAAAA ACGTGAAGAG ACTCCGTTAA GTTATTTTTT AATGACTGAC GAGAGTACAC CGAATTCTTT ATCTTCATAA
|
Protein sequence | MFDRYESGEQ AILVHISFTY EGELEDLNEC KMLISSAGAN TLGVVTGTRQ SPLPKYYVGL GKAQEIANMV RAKNADIVIF NHALSPAQER NLEALCECRV IDRNGLILDI FAQRARTYEG KLQVELAQLR HISTRLIRGW THLERQKGGI GLRGPGETQL ESDRRLLRDR IKAIQRRLAK VAKQREQGRR ARYRAEIPTI SLVGYTNAGK STLFNRITDA GVYAADQLFA TLDPTLRKID VTDVGTAILA DTVGFIRHLP HDLVAAFKAT LQETQEANIL LHVVDASDER FRENIEAVDI VLEEIDANEV PYLLVMNKID DLEDQQPRID RDEEGVPRCV WVSAMEGEGI DLLFQALTER LAGQMVEHTL RLPPELVGRF RSKFFQMQSI IKEEYQDDGS LLIDIRMQQV DWSKLEKREE TPLSYFLMTD ESTPNSLSS
|
| |