| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2766 |
|---|
| Symbol | rpsF |
|---|
| ID | 6989007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2995145 |
|---|
| End bp | 2995525 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643381035 |
|---|
| Product | 30S ribosomal protein S6 |
|---|
| Protein accession | YP_002264102 |
|---|
| Protein GI | 209696172 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0360] Ribosomal protein S6 |
|---|
| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.431916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCATT ATGAAATCGT ATTCATGGTG CATCCTGATC AAAGCGAGCA AGTTGCTGGC
ATGATCGAGC GTTACACAGG TTCAATCACA GAAGCTGGTG GTACTATCCA CCGTCTAGAA
GATTGGGGTC GTCGTCAAAT GGCTTACCCA ATCAACAAGC TGCATAAAGC ACACTACGTT
CTTATGAACG TTGAGTCTGA GCAAGCTGCA ATTGATGAAC TAGAAACTGC ATTCCGTTAC
AACGATGCTG TTCTACGTAA CATGATCATG CGTACTAAAG CTGCGATCAC TGAGCCATCA
GTAATGATGA AAGCTAAAGA AGAGCGTACT GCTAAGCGTG AAGACGCTGC ACCACGCGCT
GAAGAAGCTG CTGCTGAGTA A
|
|---|
| Protein sequence | MRHYEIVFMV HPDQSEQVAG MIERYTGSIT EAGGTIHRLE DWGRRQMAYP INKLHKAHYV
LMNVESEQAA IDELETAFRY NDAVLRNMIM RTKAAITEPS VMMKAKEERT AKREDAAPRA
EEAAAE
|
|---|
| |