Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2747 |
Symbol | metB |
ID | 6988796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2973481 |
End bp | 2974647 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643381016 |
Product | cystathionine gamma-synthase |
Protein accession | YP_002264083 |
Protein GI | 209696153 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGA GAAAACCTGC AACTATTGCT GTTCGTACTG GCATTGAAAC CGATTCACAA CACAATGCGG TTGTGCCTCC TATCTATTTA TCGACTAATT ATAGCTTTCC AGAATTTGGA GATGTTCCAA CGTACGATTA CGCTCGCTCA GGGAATCCAA CCCGAACTCA ATTAGAAACA ACATTGTCTG ATTTAGAGTG TGGTGCGGGG GCGGTGGTGA CGAACTGTGG CACTGCGGCT CTTAATTTAA TGGTATCAGC CTTGCTTGGT CCTGATGATT TAATTGTTGC CCCTCATGAC TGCTATGGCG GCACTTATCG ACTCTTTAAC ACCAGAGCAA ATAAAGGTGA TTTTCAAACG TTGTTTGTGG ATCAGTCTAA TGCCGCCGCT TTAGATGAAG CGCTTGCTAA AAAGCCAAAA CTGATCTTAT TAGAAACGCC TTCCAATCCA TTAGTTCGCG TAGTCGATAT TGCCGAAATT TGTAAAAAAG CGGCAGAAGT CGGTGCATTA GTTGCGGTTG ATAACACGTT CCTTTCTCCT GTATTACAGC AGCCACTGAC TCTTGGGGCT GATTTCGTTC TTCATTCCAC AACAAAATAC ATTAATGGGC ATTCAGACGT TGTTGGTGGT GTGATCATAT CTAAAACGAA AGAACATGCC GATGAATTGG CATGGTGGGG GAACTGCATT GGTGCAACAG GTACTGCATT TGATAGCTAT TTAACCCTGC GAGGAATTCG TACTCTTAGT GCTCGTATGC GAGTGCATGA AGAAAATGCG ATGGAAGTAT TAAAATGCTT ACAACAGCAA GAGTTAGTGG GAACGATCTA TCACCCTAGT CTACCTGAGC ACCCAGGGCA TGAAATAGCA AAGCGTCAGC AAGCGGGTTT TGGTGCAATG CTGAGTTTTG AATTAAACGG TTCGTTAGAC CAACTTAAAG TTTTTGTGAA AGCGTTAAAA TATTTCTCTT TAGCTGAATC GTTAGGAGGA GTAGAAAGTC TGATTGCTCA TCCGGGAACG ATGACACATA GAGCGATGTC AGATGAAGCT CAGGCTGCTG CCGGTTTGGT GCCGACGTTA TTACGTATTT CTGTTGGCCT AGAAGACAGT AGAGATTTAA TCGCAGATCT TACACAAGCG TTTGCTGTGG CTGCAGAGGT GAAATAA
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Protein sequence | MSERKPATIA VRTGIETDSQ HNAVVPPIYL STNYSFPEFG DVPTYDYARS GNPTRTQLET TLSDLECGAG AVVTNCGTAA LNLMVSALLG PDDLIVAPHD CYGGTYRLFN TRANKGDFQT LFVDQSNAAA LDEALAKKPK LILLETPSNP LVRVVDIAEI CKKAAEVGAL VAVDNTFLSP VLQQPLTLGA DFVLHSTTKY INGHSDVVGG VIISKTKEHA DELAWWGNCI GATGTAFDSY LTLRGIRTLS ARMRVHEENA MEVLKCLQQQ ELVGTIYHPS LPEHPGHEIA KRQQAGFGAM LSFELNGSLD QLKVFVKALK YFSLAESLGG VESLIAHPGT MTHRAMSDEA QAAAGLVPTL LRISVGLEDS RDLIADLTQA FAVAAEVK
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