| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2728 |
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| Symbol | trpS |
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| ID | 6988617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2954038 |
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| End bp | 2955054 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380997 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_002264064 |
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| Protein GI | 209696134 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC CCATCGTATT AAGTGGTGTT CAACCGTCAG GTGAACTGAG TATTGGTAAC
TACTTGGGTG CTCTACGTCA ATGGCAACAG ATGCAAGACG ATTATGATTG TCAGTACTGT
GTTGTAGACC TTCATGCCAT TACGGTTCGT CAAGATCCTA AAGCATTGCA TGAAGCGACA
CTCGATGCTC TGGCAATTTG TCTCGCGGTT GGTGTTGATC CAAAGAAGAG CACGTTATTT
GTTCAGTCAC ATGTACCAGA GCATGCTCAG CTAGGTTGGC TTCTTAACTG TTATACCCAA
ATGGGTGAAC TAAGTCGTAT GACTCAGTTT AAAGATAAGT CTGCTCGTCA TTCAAATGAT
GTGAATGTTG GGTTATTCGG TTACCCAGTC TTAATGGCGG CTGATATTTT ATTGTACGGC
GCGCATCAAG TGCCTGTGGG CAGTGATCAA AAGCAGCATT TAGAATTAGC GCGTGATATT
GCGAATCGTT TCAATAATGC TTACTGCCCT GAATCGCCTT TATTCACGGT TCCAGAACCC
TACATCCCAC AAGTGAATGC GCGTGTGATG AGTCTACAAG ATGCGACGAA GAAAATGTCT
AAATCAGATG ATAACCGTAA GAATGTTATT ACGCTGTTAG AAGATCCTAA GTCAATTCTT
AAGAAAATCA ATAAAGCGCA AACAGACGCA GAAATGCCCC CTCGTATTGC TCATGATTGG
GAAAACAAAG CCGGTATTTC AAACCTGATG GGTCTGTATT CTGCAGCAAG TGGCCAAACG
TTTGAAGAGA TCGAAGCTCA ATACCAAGGT GTTGAAATGT ATGGTCCATT CAAGAAAGAC
GTTGGTGAAG CGATTGTGAC GATGCTAGAG CCGATTCAAT CTGAATATAA ACGTATTCGT
GATGATCGTA CGTATATGGA TTCAGTAATG AAAGCGGGAG CTGAAAAGGC ATCAGAACGC
GCTGCAGTGA CACTGAAAAA AGCGTATGAA GCCGTTGGTT TTGTTACTCG CCCATAG
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| Protein sequence | MSKPIVLSGV QPSGELSIGN YLGALRQWQQ MQDDYDCQYC VVDLHAITVR QDPKALHEAT
LDALAICLAV GVDPKKSTLF VQSHVPEHAQ LGWLLNCYTQ MGELSRMTQF KDKSARHSND
VNVGLFGYPV LMAADILLYG AHQVPVGSDQ KQHLELARDI ANRFNNAYCP ESPLFTVPEP
YIPQVNARVM SLQDATKKMS KSDDNRKNVI TLLEDPKSIL KKINKAQTDA EMPPRIAHDW
ENKAGISNLM GLYSAASGQT FEEIEAQYQG VEMYGPFKKD VGEAIVTMLE PIQSEYKRIR
DDRTYMDSVM KAGAEKASER AAVTLKKAYE AVGFVTRP
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