| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2727 |
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| Symbol | gph |
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| ID | 6989143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2953235 |
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| End bp | 2953918 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380996 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_002264063 |
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| Protein GI | 209696133 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA ACATCAAACT GATCGCGTTT GATTTGGATG GAACACTGCT AGATAGTGTT
CCAGACTTAG CTCGTGCGGT TGATCTTGCT ATGCAAGACC TAGATTACCC TGGCGTTACA
TTAGAGCAAG CTTCTCATTG GATAGGCAAT GGTGCTGATG TTTTGGTCTC TCGTGCTTTA
AGTCAAAGTG TGGTCGTTGC TGAAGGTCTT AATCTTGAGT TGGTAAAAAC AGCTCGTGGG
CGTTTAGATC ATCATTACCA TGAGGGTGGC CATAAGCTGA GCCATCTTTA CCCAAACGTA
AAAGAGACAT TAGAGTCGCT ATATCAGGAA GGGTATACGC TAGCGCTTGT GACGAATAAG
CCCGCGCAAT TTGTTCCTGA ATTATTAAAA CAACATCAAC TTGAACATTT ATTTGTTGAT
GTTATTGGTG GCGATACGTT TGTCGAGAAG AAGCCTAATC CATTCGCTTT AAATTGGTTA
CTCGATAAGC ATCATCTTTT GCCGACGCAA ATGTTGATGG TGGGTGATTC TCAAAATGAT
ATTCAAGCCG CTAAAGCCGC TGGTTGTTAT AGTTTCGGAT TAACTTATGG TTATAACCAT
GGGGAACCTA TTGCAGACAG TGATCCTGAT GTTGTGAGTG ATGAATTTAA TCATTTATTA
GCCGTGATGA GTGTGGCAAG ATAG
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| Protein sequence | MFENIKLIAF DLDGTLLDSV PDLARAVDLA MQDLDYPGVT LEQASHWIGN GADVLVSRAL
SQSVVVAEGL NLELVKTARG RLDHHYHEGG HKLSHLYPNV KETLESLYQE GYTLALVTNK
PAQFVPELLK QHQLEHLFVD VIGGDTFVEK KPNPFALNWL LDKHHLLPTQ MLMVGDSQND
IQAAKAAGCY SFGLTYGYNH GEPIADSDPD VVSDEFNHLL AVMSVAR
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