Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2665 |
Symbol | |
ID | 6989156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2882194 |
End bp | 2883300 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380935 |
Product | hypothetical protein |
Protein accession | YP_002264003 |
Protein GI | 209696073 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00155012 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACCAT TAGAAAAATA CCAGCTTGAC CTTACGCAAG ATACATTTCA TCACGACAGT GCTCAGCAAC ACGCCGTGGA GTGTTTGGAT GAGTTATATC ATCGATTATT GCAACCAAAA ACGACACCCA AAGCAGAACG AAAATCTTGG TTGTCTGTAT TTAAAAAATC AGAACCTCAG ACCGTCGTGC CAGAGAAAGG ATTGTATTTT TGGGGAGGAG TGGGGAGAGG AAAAACGTAT TTAGTCGATA CTTTTTACGA TGCCTTGCCT ACTGAACGTA AAATGCGAGT GCACTTCCAT CGGTTTATGC AGCGAGTTCA TGATGAGCTT GGTGAGCTTC AACAACAAGC GGATCCATTG TTGATTGTGG CTGATAAATT TAAACAAGAA ACCGATATTA TCTGTTTTGA TGAATTCTTT GTTTCTGATA TTACCGATGC CATGATATTA GCGACATTAT TAGAGGCGTT ATTTGAACGA GGTATTGCCC TTGTTGCGAC ATCAAATATT GTCCCTCAGG AGTTATACCG AAATGGATTG CAAAGGGCGC GTTTTATTCC TGCTATTACG TTGATCGAAC AACACTGCCA GATAGTTAAT GTGGACAGTG GCATTGATTA TCGTTTAAGG ACGTTAGAGC AAGCTGAAAT CTATCATTTC CCTCTCGATA GTTTAGCTCA ACAAAATATG TTGGATTATT TCCATCAGTT AACGTCAGAA ACGGAACATG AAGAGAAAGA AATAGAAATT AATCATCGGA TATTGTCCGT GAATGCCGAA GGGGATGGGG TTGTGCATTT TGAATTCACT TCTCTATGTG AAAGTGCGCG CAGTCAACAT GATTACATTG AATTGTCTCG TTTGTATCAT ACGGTTCTTC TTTCTAACGT AAAGGTCATG GGAGAGCTCA ATGATGATGC GGCTCGTCGT TTTATTGCCA TGGTTGATGA GTTTTATGAG CGAAACGTGA AATTAATCAT TTCAGCGGAA GTCCAATTAG CTGATTTGTA TCAAAATGGA CGATTAACCT TTGAATTTAA ACGTTGTCAG TCAAGGTTGA TTGAAATGCA AAGTCATGAG TATCTAGCAA AAGAACATTT ATCTTAG
|
Protein sequence | MTPLEKYQLD LTQDTFHHDS AQQHAVECLD ELYHRLLQPK TTPKAERKSW LSVFKKSEPQ TVVPEKGLYF WGGVGRGKTY LVDTFYDALP TERKMRVHFH RFMQRVHDEL GELQQQADPL LIVADKFKQE TDIICFDEFF VSDITDAMIL ATLLEALFER GIALVATSNI VPQELYRNGL QRARFIPAIT LIEQHCQIVN VDSGIDYRLR TLEQAEIYHF PLDSLAQQNM LDYFHQLTSE TEHEEKEIEI NHRILSVNAE GDGVVHFEFT SLCESARSQH DYIELSRLYH TVLLSNVKVM GELNDDAARR FIAMVDEFYE RNVKLIISAE VQLADLYQNG RLTFEFKRCQ SRLIEMQSHE YLAKEHLS
|
| |