Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2662 |
Symbol | |
ID | 6988960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2880089 |
End bp | 2880697 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643380932 |
Product | ubiquinol-cytochrome c reductase iron-sulfur subunit (rieske iron-sulfur protein) |
Protein accession | YP_002264000 |
Protein GI | 209696070 |
COG category | [C] Energy production and conversion |
COG ID | [COG0723] Rieske Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0104541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGAAA GTTGGATGAG CAATGCGCCA GTGAGTAATG GTCGACGTCG TTTCTTGACT GCAACAACAG CTGTTGTTGG TGGTTTAGGG GCAGCGGCGG TGGCCGTACC TTTTATTAAA TCTTGGAACC CGAGTGCACG AGCCAAAGCG GCAGGTGCAC CGGTTGAAGT CGACATCAGT AAGCTTGAAA ACGGGCAAAT GGTTCGTGTT GAATGGCGAG GTAAGCCTGT ATGGGTTGTT CGTCGTTCAG AAGCACTTCT GCAATCATTA ACTGAAATTG ACGGACAACT TAGAGACCCA TCTTCAGGTG AAGAGCAGCA ACCTCAATAT GCACAAAATG CATATCGCTC AATTAAACCT GAGATATTTT TAGCCGTTGG TATTTGTACT CACCTTGGTT GTTCACCTAC CTATTTACCT GACAGTTTTA GTGAACAAGT TAAAGGAGTT AACTCTGGTT TCTTCTGCCC ATGCCATGGT TCTAAATTTG ATATGGCAGG TCGAGTATTC CAAGGCGTAC CTGCACCATT AAATCTCGTG GTGCCAAAAC ACATGTACCT TAGTGATACT CGTATCCTAA TTGGGGTTGA TGACGGAGGG GAAGCCTAA
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Protein sequence | MGESWMSNAP VSNGRRRFLT ATTAVVGGLG AAAVAVPFIK SWNPSARAKA AGAPVEVDIS KLENGQMVRV EWRGKPVWVV RRSEALLQSL TEIDGQLRDP SSGEEQQPQY AQNAYRSIKP EIFLAVGICT HLGCSPTYLP DSFSEQVKGV NSGFFCPCHG SKFDMAGRVF QGVPAPLNLV VPKHMYLSDT RILIGVDDGG EA
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