Gene VSAL_I2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2646 
SymbolmurD 
ID6988572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2863516 
End bp2864844 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content41% 
IMG OID643380916 
ProductUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 
Protein accessionYP_002263984 
Protein GI209696054 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGTT TTGGTGGTGT AAAAAACGTT GTTGTGGTTG GCTTAGGAAT GACAGGGTTA 
TCTGTTGTTA AGCATTTGCT GAGACAACCA GAAGCGTTAA TAGTCAAAGT TATTGATACT
CGTGAAACGC CACCAGGCCA AGAACAATTG CCTGAACAGG TTGAGTTACA TTCTGGTAGT
TGGCAACAAG ATTGGCTGTT AGACGCCGAT CTTATTGTTA CTAACCCAGG TATTGCGCTT
GCTTCTTCTC AATTACAACC AGCCATTAAA AAGGGCACGC CAGTTGTTGG TGATATTGAA
TTGTTTGCGT GGGCAGTGAC GGCCCCTGTG ATTGCAATTA CCGGCTCTAA TGGCAAAAGT
ACGGTCACCG ATTTAACCGG TGAAATGGCC AATGCTGCAG GGGTTAAAAC CGCTGTCGGT
GGTAATATCG GCTTTGCTGC GTTAGATCTA TTAGAACAAG ATGCCGATCT TTATGTACTG
GAACTATCCA GTTTTCAACT CGAAACTACA TCATCATTAA AGCTAAAAGC CGCCGCATTT
TTGAATCTAT CTGAAGACCA TATGGATAGA TACCAAGGTA TGGAAGATTA TCGTCAAGCT
AAGTTGCGTG TATTTGATCA TGCCGATGTT TGTATTGTTA ATCGTGATGA TAAAGAAACT
TACCCAGATA CAGCAGATAA AACGTTAATT AGTTTTGGGT TTGATACCAG TGATGAGTAC
GGTTGCATTG AAGAAAATGG TCGGCTGTTT TTAGCTAAAA ATAACACACC TATTATTGCT
GCCAATGAGC TTGGTCTTGT TGGTAAACAC AATATTGCTA ACAGCCTTGT TGCTCTTGCT
TTACTTGATG CTGCAGGTGT TAATACCAAT AAAACATTAG ATACGTTGAA GCGTTACAAT
GGATTAACGC ATCGCTGCCA AGTTGTCGCT GAAATGAATG GTGTTCGATG GGTTAACGAT
TCTAAAGCAA CTAATGTGGC GAGTACACTG GCTGCACTTT CTGGTCTTAG TATTGAAGGG
AAACTTCATT TGTTGGTTGG TGGTGTTGGT AAAGGGGCTG ATTTTTCGGA ATTATCGCCA
GCATTGAACG AATTGGATTT AATGATGTAT TGTTTTGGCG AGGATGGCGT GCAATTTATG
CCTTTAGATC CTCGGTCTCG ATTATGCCAA ACAATGGATG AGGCGATTGA GTTATTATCC
CCTGAATTAA CATTTGGAGA TATGGTAATG CTTTCTCCTG CATGTGCCAG TTTTGATCAA
TATACTAACT TTATGGCAAG AGGCGATGCA TTTACAGCAT TAGCTAAACA CTATTCAACT
GAGAAATAA
 
Protein sequence
MTGFGGVKNV VVVGLGMTGL SVVKHLLRQP EALIVKVIDT RETPPGQEQL PEQVELHSGS 
WQQDWLLDAD LIVTNPGIAL ASSQLQPAIK KGTPVVGDIE LFAWAVTAPV IAITGSNGKS
TVTDLTGEMA NAAGVKTAVG GNIGFAALDL LEQDADLYVL ELSSFQLETT SSLKLKAAAF
LNLSEDHMDR YQGMEDYRQA KLRVFDHADV CIVNRDDKET YPDTADKTLI SFGFDTSDEY
GCIEENGRLF LAKNNTPIIA ANELGLVGKH NIANSLVALA LLDAAGVNTN KTLDTLKRYN
GLTHRCQVVA EMNGVRWVND SKATNVASTL AALSGLSIEG KLHLLVGGVG KGADFSELSP
ALNELDLMMY CFGEDGVQFM PLDPRSRLCQ TMDEAIELLS PELTFGDMVM LSPACASFDQ
YTNFMARGDA FTALAKHYST EK