Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2646 |
Symbol | murD |
ID | 6988572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2863516 |
End bp | 2864844 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380916 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_002263984 |
Protein GI | 209696054 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGGTT TTGGTGGTGT AAAAAACGTT GTTGTGGTTG GCTTAGGAAT GACAGGGTTA TCTGTTGTTA AGCATTTGCT GAGACAACCA GAAGCGTTAA TAGTCAAAGT TATTGATACT CGTGAAACGC CACCAGGCCA AGAACAATTG CCTGAACAGG TTGAGTTACA TTCTGGTAGT TGGCAACAAG ATTGGCTGTT AGACGCCGAT CTTATTGTTA CTAACCCAGG TATTGCGCTT GCTTCTTCTC AATTACAACC AGCCATTAAA AAGGGCACGC CAGTTGTTGG TGATATTGAA TTGTTTGCGT GGGCAGTGAC GGCCCCTGTG ATTGCAATTA CCGGCTCTAA TGGCAAAAGT ACGGTCACCG ATTTAACCGG TGAAATGGCC AATGCTGCAG GGGTTAAAAC CGCTGTCGGT GGTAATATCG GCTTTGCTGC GTTAGATCTA TTAGAACAAG ATGCCGATCT TTATGTACTG GAACTATCCA GTTTTCAACT CGAAACTACA TCATCATTAA AGCTAAAAGC CGCCGCATTT TTGAATCTAT CTGAAGACCA TATGGATAGA TACCAAGGTA TGGAAGATTA TCGTCAAGCT AAGTTGCGTG TATTTGATCA TGCCGATGTT TGTATTGTTA ATCGTGATGA TAAAGAAACT TACCCAGATA CAGCAGATAA AACGTTAATT AGTTTTGGGT TTGATACCAG TGATGAGTAC GGTTGCATTG AAGAAAATGG TCGGCTGTTT TTAGCTAAAA ATAACACACC TATTATTGCT GCCAATGAGC TTGGTCTTGT TGGTAAACAC AATATTGCTA ACAGCCTTGT TGCTCTTGCT TTACTTGATG CTGCAGGTGT TAATACCAAT AAAACATTAG ATACGTTGAA GCGTTACAAT GGATTAACGC ATCGCTGCCA AGTTGTCGCT GAAATGAATG GTGTTCGATG GGTTAACGAT TCTAAAGCAA CTAATGTGGC GAGTACACTG GCTGCACTTT CTGGTCTTAG TATTGAAGGG AAACTTCATT TGTTGGTTGG TGGTGTTGGT AAAGGGGCTG ATTTTTCGGA ATTATCGCCA GCATTGAACG AATTGGATTT AATGATGTAT TGTTTTGGCG AGGATGGCGT GCAATTTATG CCTTTAGATC CTCGGTCTCG ATTATGCCAA ACAATGGATG AGGCGATTGA GTTATTATCC CCTGAATTAA CATTTGGAGA TATGGTAATG CTTTCTCCTG CATGTGCCAG TTTTGATCAA TATACTAACT TTATGGCAAG AGGCGATGCA TTTACAGCAT TAGCTAAACA CTATTCAACT GAGAAATAA
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Protein sequence | MTGFGGVKNV VVVGLGMTGL SVVKHLLRQP EALIVKVIDT RETPPGQEQL PEQVELHSGS WQQDWLLDAD LIVTNPGIAL ASSQLQPAIK KGTPVVGDIE LFAWAVTAPV IAITGSNGKS TVTDLTGEMA NAAGVKTAVG GNIGFAALDL LEQDADLYVL ELSSFQLETT SSLKLKAAAF LNLSEDHMDR YQGMEDYRQA KLRVFDHADV CIVNRDDKET YPDTADKTLI SFGFDTSDEY GCIEENGRLF LAKNNTPIIA ANELGLVGKH NIANSLVALA LLDAAGVNTN KTLDTLKRYN GLTHRCQVVA EMNGVRWVND SKATNVASTL AALSGLSIEG KLHLLVGGVG KGADFSELSP ALNELDLMMY CFGEDGVQFM PLDPRSRLCQ TMDEAIELLS PELTFGDMVM LSPACASFDQ YTNFMARGDA FTALAKHYST EK
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