| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2627 |
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| Symbol | ampD |
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| ID | 6988952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2843249 |
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| End bp | 2843800 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380898 |
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| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
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| Protein accession | YP_002263966 |
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| Protein GI | 209696036 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGATTCA CGTTATCAAC AACGCATTGG ATCAATGAAG CGAAACACGT TGTCTCGCCA
TTTTATGACG AACGCTCCGA TGACTTAGAC ATATCTTTAC TTGTGGTACA CAACATCAGC
TTACCGCCGG GTCAGTTTGG TGGCCCTTAT ATTGAACAAT TATTTACCGG TACTTTAAAT
CCGAACGAAC ACCCATTCTT TAACGTTATC CATCAATTTA AAGTGTCTGC CCATTGTTTG
ATTCGTCGAG ATGGGCGTGT TATTCAATTT GTGCCCTTTA ATTCTCGAGC GTGGCATGCG
GGAGCATCGT CGTTTGCGGG CAGATCGAAA TGCAATGATT ACAGTATCGG CATTGAATTA
GAAGGAACGG ATTCAGTGGC CTATACTGAG GAGCAGTATC AATCACTGGC TTCATTAACA
AAGGTGATAC AACAGCATTA CCCGTTAGTA AAGGATGATC GTATTACGGG TCATCAGTAT
ATAGCGCCGC TTAGAAAGAC GGATCCGGGG CTGTCTTTTC ATTGGGAAAA GTATAATAAG
TTAAGAAAAT AG
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| Protein sequence | MRFTLSTTHW INEAKHVVSP FYDERSDDLD ISLLVVHNIS LPPGQFGGPY IEQLFTGTLN
PNEHPFFNVI HQFKVSAHCL IRRDGRVIQF VPFNSRAWHA GASSFAGRSK CNDYSIGIEL
EGTDSVAYTE EQYQSLASLT KVIQQHYPLV KDDRITGHQY IAPLRKTDPG LSFHWEKYNK
LRK
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