Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2623 |
Symbol | lpdA |
ID | 6987853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2836169 |
End bp | 2837596 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643380895 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_002263963 |
Protein GI | 209696033 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.798797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAG AAATTAAAGC ACAAGTTGTC GTACTTGGTG CCGGCCCTGC TGGTTACTCT GCCGCATTCC GTTGTGCAGA TTTAGGTTTA GAAACAGTTA TCGTTGAACG TTACAACACG CTTGGTGGTG TATGTTTGAA TGTGGGTTGT ATCCCATCAA AAGCCTTGCT TCACGTAGCT AAAGTTATCG AAGAAGCAAA AGCGATGGCC GCTCACGGTA TCGTATTTGG TGAACCTCAA ACTGACATCG ATAAGATCCG TTTGTGGAAA GAAAAAGTAG TAACACAACT AACTGGCGGT CTTGGCGGTA TGGCCAAGAT GCGTAAAGTA ACGGTAGTTA ATGGCTTTGG TAAATTTACT GGTGCTAATA CTATTGAAGT GACTGCTGAA GATGGCAATA CAACAATCAA TTTTGATAAT GCGATTGTTG CTGCTGGTTC TCGTCCAATT AAACTGCCAT TCATCCCACA TGAAGATCCA CGTATTTGGG ATTCAACGGA TGCACTTGAG CTAAAAGAAG TCCCTAAGAA GCTGCTTATT ATGGGCGGTG GTATTATCGG TCTAGAAATG GGTACGGTTT ACCATGCTCT GGGTTCTCAA GTTGATGTTG TTGAGATGTT TGACCAGGTT ATTCCTGCGG CAGATAAAGA TATCGTTAAA GTTTACACTA AACGTATCAA AGACAAATTC AATCTAATGC TTGAAACGAA AGTGACAGCA GTAGAAGCAA AAGAAGACGG TATTTACGTA TCAATGGAAG GCAAAAAAGC ACCAGCAGAA GCTGAGCGTT ATGATGCTGT TCTTGTTGCT ATCGGCCGTG TTCCTAATGG TGCTTTATTA GACGTTGAAA AAGCAGGAGT TGCTGTTGAT GAGCGTGGTT TCATCAATGT AGATAAGCAA ATGCGTACTA ATGTACCTCA TATTCATGCC ATTGGTGATA TCGTAGGTCA ACCTATGCTT GCACACAAAG GCGTGCATGA AGGTCATGTT GCTGCGGAAG TTATTTCTGG TAAGAAGCAC TACTTCGATC CTAAAGTAAT TCCTTCAATT GCGTACACGG AGCCCGAAGT TGCTTGGGTT GGTAAAACAG AGAAAGAAGC AAAAGCTGAA GGCATCAACT ACGAAGCTGC AAGCTTCCCT TGGGCCGCAT CAGGTCGTGC AATCGCTTCA GATTGTGCAG ATGGTCTTAC TAAGCTTCTT TTTGATAAAG ATACTAACCG TGTTATCGGT GGTGCTATTG TTGGTACTAA CGCTGGTGAG CTTCTTGGTG AAATCGGTCT TGCAATTGAA ATGGGTTGTG ATGCTGAAGA TATCGCATTA ACTATCCATG CTCACCCAAC ATTGCATGAA TCAATTGGTA TGGCTGCTGA AATTTATGAA GGTTCTATTA CTGACCTTCC AAATGCAAAA GCCGTTAAGA AAAAATAA
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Protein sequence | MSKEIKAQVV VLGAGPAGYS AAFRCADLGL ETVIVERYNT LGGVCLNVGC IPSKALLHVA KVIEEAKAMA AHGIVFGEPQ TDIDKIRLWK EKVVTQLTGG LGGMAKMRKV TVVNGFGKFT GANTIEVTAE DGNTTINFDN AIVAAGSRPI KLPFIPHEDP RIWDSTDALE LKEVPKKLLI MGGGIIGLEM GTVYHALGSQ VDVVEMFDQV IPAADKDIVK VYTKRIKDKF NLMLETKVTA VEAKEDGIYV SMEGKKAPAE AERYDAVLVA IGRVPNGALL DVEKAGVAVD ERGFINVDKQ MRTNVPHIHA IGDIVGQPML AHKGVHEGHV AAEVISGKKH YFDPKVIPSI AYTEPEVAWV GKTEKEAKAE GINYEAASFP WAASGRAIAS DCADGLTKLL FDKDTNRVIG GAIVGTNAGE LLGEIGLAIE MGCDAEDIAL TIHAHPTLHE SIGMAAEIYE GSITDLPNAK AVKKK
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