| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2607 |
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| Symbol | pcnB |
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| ID | 6987844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2823105 |
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| End bp | 2824430 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380882 |
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| Product | poly(A) polymerase (plasmid copy number protein) |
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| Protein accession | YP_002263950 |
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| Protein GI | 209696020 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000156252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAACTGA ACGTTATCAC ACGCCAAGAA CATAATATTT CACGTAAAGA CTTAAGTGAT
AATGCACTCA AAGTTCTTTA CCGCCTAAGC AATGCTGGAT ACGACGCCTA TCTAGTAGGA
GGAGGTGTGC GCGATATAAT TCTAGGACAA GAACCTAAAG ATTTTGATAT CGCCACCAAT
GCCACTCCCG AGCAAATCAA AAAACTATTT AGAAATTGCC GATTGATTGG CCGTAGATTC
CGTCTTGCTC ATATTCTTTT TGGCAGAGAT GTCATTGAGG TTGCCACTTT CCGTGGTCAC
CATAAAGAAG AAGAATCAGA GAAAAAGAAC ATCTCTTCTC AATCAAAAGA AGGCATGTTA
TTGCGTGATA ATGTCTATGG CACCGTTGAA GAAGATGCCC AACGTCGTGA CTTTACGATT
AATGCGATGT ATTACAACAT TGCAGATTAC TCAATTCATG ATTATGCCAA TGGCATTGAA
GATTTAAAAA ATGGTGTCGT ACGTCTTATC GGTGATCCTG AAACTCGTTA TCGAGAAGAT
CCTGTTCGAA TGCTACGTGC GGTACGCTTT GCTGCAAAAT TAGACATGAC AATTTGCAAT
AAAACCGCAG AACCAATGGT TGAATTGTCC CCACTTTTAC GTGATATCCC TGCGGCTCGT
TTATTTGAAG AATCACTTAA ACTACTTCAA GCAGGAAAAG GCTTAAATAC CTATTTAATG
CTGCGTAAAT TTAACTTGTT TCAACAGTTG TTTCCCGCGC TTACGCCATT TTTAACAAAA
GAAGGCAACA GTCAAACGGA ACAAATGATC GAACTTGTAT TACATTCAAC AGACAAACGT
ATAAATAGCG GTCAACGAGT TAACCCTGCA TTCATGTTTG CAGCAATGTT ATGGTATCCA
TTAACGGCTC AAGCAAAAGA AATTCAAAAC GAAAATAGCA AACTTGATGA ATACGAATCC
ATTATGGAAG CGTCTAATAT CATGCTTGAT ATTCAAGTAA AAAGCACGGC GGTCCCTCGT
CGCTTAACCG CGACTATTCG TGATATTTGG CAATTACAAC TCCGTTTACC TCGTCGTACT
GGTAAACGTG CGTTTATTCT TATTGACCAA CAAAAATTCC GTGCTGCTTA TGATTTCCTT
GAAATGCGTG GAAAAGTAGA AGGTGGTGAT GTAAAAGCAC TCGCTGAATG GTGGACTGAA
TTCCAGGACG CACCCGTTCC ACACCGTAAT AACATGATTC AAGGCTTACA TGGTGGCCGT
TCAACCGGTA CACGTAAACG TCGTAGCCCT TATCGTAAGA AAAAAAGAAC GAATAACGAT
TCATGA
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| Protein sequence | MKLNVITRQE HNISRKDLSD NALKVLYRLS NAGYDAYLVG GGVRDIILGQ EPKDFDIATN
ATPEQIKKLF RNCRLIGRRF RLAHILFGRD VIEVATFRGH HKEEESEKKN ISSQSKEGML
LRDNVYGTVE EDAQRRDFTI NAMYYNIADY SIHDYANGIE DLKNGVVRLI GDPETRYRED
PVRMLRAVRF AAKLDMTICN KTAEPMVELS PLLRDIPAAR LFEESLKLLQ AGKGLNTYLM
LRKFNLFQQL FPALTPFLTK EGNSQTEQMI ELVLHSTDKR INSGQRVNPA FMFAAMLWYP
LTAQAKEIQN ENSKLDEYES IMEASNIMLD IQVKSTAVPR RLTATIRDIW QLQLRLPRRT
GKRAFILIDQ QKFRAAYDFL EMRGKVEGGD VKALAEWWTE FQDAPVPHRN NMIQGLHGGR
STGTRKRRSP YRKKKRTNND S
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