Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2592 |
Symbol | |
ID | 6987835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2794974 |
End bp | 2796119 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643380860 |
Product | carbohydrate diacid regulator (sugar diacid regulator) |
Protein accession | YP_002263938 |
Protein GI | 209696008 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTAA CCACTATCAT TGCGAAACAA ATCGTAGAAA GAACAATGAA AATAATTAAG CATTCAGTCA ATGTCATGGA TGAATACGGC GTGATTATCG GTTCAGGTGA CCAAACAAGA TTACACTGTC GTCATGAGGG TGCGATTTTA GCGATTAATG AAAATAGAAT CGTCGAAATA GATAACGCCA CCGCATTACA ATTACGTGGT GTAAAAGCGG GAATAAATCT CCCTATTATT TTTCAAAATA CGGTTATTGG TGCTGTTGGC GTTTCTGGAA AGCTTTGCGA AATACAACAA TATGGTGAAC TCGTTAAAAT GACCGCAGAA CTCATCATAG AACAAGCGGC TTTAATGACT GAAATACAGT GGTCAAAAAG GCACAAAGAA GAATTAGTAC TGCAATTAAT TCAACCTTCA GATTTAAATA CACAACAACT CAACTCTATT GCAGAGCGGT TAGAACTCGA TCTTCAACAA CCAAGAATAG CTACAATTAT AAAAGTAGAT TCTTTTAAAG GAGAAAATTT ATCTCTGACT CACTTACAAA AACTTGTCCA TTTATTGGAA TATCCTGAAC GAGATAATCT GGTTGCTATT AGTTCAGTTA CATTAAATGA AGTCGTCGTT TTGAAACCAA TCACATTAAC TGAAAATGGT TGGAACCGTA CTTATGAAGA AAAACGTATT CGCCAACTTT TTCAACGAAT TTCTCATGAT GAAAAATTTA CGATAAAAAT AGCACTCGGT GATTATTTTC CAACAATAGA AGGACTTGCA CAGTCCTATA TGACAGCAAA AGCCACAATG AACACTGCAA ACTCAAAAAA TCGAATTCTT TTTTATCAAG ATAATGTTCT TCCTGTATTA ATTAATGGTC TCAAATCAGA TGATTGGCGC TCGGAACAAT TGAAACTGCC AATAACAAAA CTTACTGCTC ACGATTCAAA AGGAGTATTA CTTAAAACGC TCCACGCTTT TTTTAACCAT AATTGTGATT CAGCTCAAAC CTGCAATGCT CTCCACATAC ATAGAAATAC ATTACGATAC AGATTAGATA ACATACAAAA AGAAACAGGC TTAGATATCA ATAAGATAAA TGAAATTACA TATTTATATC TAGCGACATT AATGCATGAA CAATAA
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Protein sequence | MQLTTIIAKQ IVERTMKIIK HSVNVMDEYG VIIGSGDQTR LHCRHEGAIL AINENRIVEI DNATALQLRG VKAGINLPII FQNTVIGAVG VSGKLCEIQQ YGELVKMTAE LIIEQAALMT EIQWSKRHKE ELVLQLIQPS DLNTQQLNSI AERLELDLQQ PRIATIIKVD SFKGENLSLT HLQKLVHLLE YPERDNLVAI SSVTLNEVVV LKPITLTENG WNRTYEEKRI RQLFQRISHD EKFTIKIALG DYFPTIEGLA QSYMTAKATM NTANSKNRIL FYQDNVLPVL INGLKSDDWR SEQLKLPITK LTAHDSKGVL LKTLHAFFNH NCDSAQTCNA LHIHRNTLRY RLDNIQKETG LDINKINEIT YLYLATLMHE Q
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