| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2558 |
|---|
| Symbol | arcA |
|---|
| ID | 6987815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 2740146 |
|---|
| End bp | 2740865 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643380824 |
|---|
| Product | two-component response regulator |
|---|
| Protein accession | YP_002263906 |
|---|
| Protein GI | 209695976 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCC CTCAGATCCT AATCGTTGAA GATGAACACG TTACTCGTAA TACACTAAAA
AGCATTTTTG AAGCAGAAGG CTACAATGTA TTCGAAGCAA GCGATGGTGA AGAAATGCAC
ACTGTGCTTT CTGAACAACA GCTTAATCTT GTGATTATGG ACATCAACCT TCCAGGAAAA
AATGGCCTTC TTCTTGCTCG TGAACTTCGC GAACGTGGTG ATATGGCTCT TATGTTCCTT
ACAGGTAGAG ACAATGAAGT TGATAAGATT TTAGGATTAG AAATCGGTGC TGATGATTAC
ATCACAAAAC CATTTAATCC TCGCGAGCTG ACTATTCGTG CACGTAACTT ATTGACTCGT
TCAATGAATC AAAGCACAGC CGTTGAAGAT AAAAAACTGG TTGAGCGTTA TACATTCAAT
GGTTGGACTG TTGAAATCAA CAGCCGCTCT CTAGTTAGCC CAAGCGGTGA AAGCTACAAG
CTTCCTCGCT CTGAATTCCG TGCCTTACTT CACTTCTGTG AAAACCCAGG TAAAATTCAG
ACTCGTGCTG ACTTATTGAA AAAAATGACA GGCCGTGAGC TAAAACCTCA TGATCGTACT
GTTGATGTAA CTATTCGTCG CATCCGTAAG CATTTTGAAT CAGTAACAGA TACTCCTGAG
ATTATCGCTA CTATTCATGG TGAAGGTTAC CGTTTTTGTG GTGATCTAGA AGAGTTATAA
|
|---|
| Protein sequence | MQTPQILIVE DEHVTRNTLK SIFEAEGYNV FEASDGEEMH TVLSEQQLNL VIMDINLPGK
NGLLLARELR ERGDMALMFL TGRDNEVDKI LGLEIGADDY ITKPFNPREL TIRARNLLTR
SMNQSTAVED KKLVERYTFN GWTVEINSRS LVSPSGESYK LPRSEFRALL HFCENPGKIQ
TRADLLKKMT GRELKPHDRT VDVTIRRIRK HFESVTDTPE IIATIHGEGY RFCGDLEEL
|
|---|
| |