Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2544 |
Symbol | serA |
ID | 6987809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2724503 |
End bp | 2725732 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380809 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_002263892 |
Protein GI | 209695962 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.115299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG TATCTCTGGA AAAAGAAAAA ATTAAAATTC TTCTTTTAGA AGGATTGCAC CCATCTTGTG TTGAAGTTTT TCAAGCTGAC GGCTATACAA ACATTGAATA CCATAAAGGT TCATTGTCAG AAGAAGAGCT TCTTGAAGCA GTAAAAGATG TCCACTTCAT AGGTTTACGA TCACGAACTC AACTAACCCA AGAAGTGTTT GATGCTGCTA ATAAATTAGT TGCCGTTGGT TGTTTCTGTA TTGGTACGAA CCAAGTAAAC CTAACCGCAG CAGCAAAACG CGGTATTCCT GTCTTTAATG CCCCGTTCTC TAATACACGT AGTGTGGCTG AACTAGTATT GGGGCAAATC CTATTACTGC TTCGCGGTAT TCCAGAAAAG AATGCACAAG CTCACCGTGG TATCTGGAAA AAAAGTGCTG ACTCTTCTTT TGAAGCCAGA GGCAAACGTT TGGGTATCAT AGGTTACGGA CATATCGGCA CACAATTGGG GATCTTAGCT GAAAACCTAG GCATGCGTGT TTACTATTAT GATATTGAAA ATAAATTATC ATTAGGTAAC GCCACTCAAA TTCAAACCAT GAGTGAACTA TTAAACAAGT GTGATGTTAT TACCCTTCAT GTACCTGAAA CCGCAGGCAC AAAAGACATG ATGGGTGCAG AAGAGTTCGC AAGAATGAAA CCAGGGGCAA TCTTTATCAA TGCTGCTCGT GGTACCGTCG TAAAAATACC CGACTTATGT GCAGCGCTTG AATCTGGCCA TCTAGGTGGT GCCGCTATTG ACGTATTCCC AGTAGAACCT AAAACAAATG CAGACCCATT TGAATCACCA TTGCAAAAGT TTGATAATGT TATCCTAACA CCTCATGTCG GAGGCTCAAC TCAAGAAGCT CAAGAAAACA TTGGGGTAGA AGTCGCAGGT AAACTTACAA AATACTCAGA TAATGGTTCA ACACTGTCAT CAGTGAACTT CCCAGAAGTC TCTCTACCTC TACATACTGG CACGTCTCGT TTACTTCATA TTCATGAGAA CCGCCCAGGC ATTCTGACTA AAATTAACAG TATTTTTGCG GATAAAGGGA TTAATATCGC GGCACAATAC CTACAAACCT CATCAGAAAT GGGCTATGTC GTTATTGATG TTGAAGCCGC TCGTTCAGAA GAAGCATTAA CGAAGCTAAA AGATATTGAA GGTACTATCC GAGCCCGTAT CCTTCACTAA
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Protein sequence | MAKVSLEKEK IKILLLEGLH PSCVEVFQAD GYTNIEYHKG SLSEEELLEA VKDVHFIGLR SRTQLTQEVF DAANKLVAVG CFCIGTNQVN LTAAAKRGIP VFNAPFSNTR SVAELVLGQI LLLLRGIPEK NAQAHRGIWK KSADSSFEAR GKRLGIIGYG HIGTQLGILA ENLGMRVYYY DIENKLSLGN ATQIQTMSEL LNKCDVITLH VPETAGTKDM MGAEEFARMK PGAIFINAAR GTVVKIPDLC AALESGHLGG AAIDVFPVEP KTNADPFESP LQKFDNVILT PHVGGSTQEA QENIGVEVAG KLTKYSDNGS TLSSVNFPEV SLPLHTGTSR LLHIHENRPG ILTKINSIFA DKGINIAAQY LQTSSEMGYV VIDVEAARSE EALTKLKDIE GTIRARILH
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