Gene VSAL_I2511 details

Gene Information

• Locus tag: VSAL_I2511
• Symbol: ispF
• ID: 6989338
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2690678
• End bp: 2691157
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643380775
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_002263859
• Protein GI: 209695929
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATTG GACACGGATT TGATGTACAT AAATTTGGTG GAGAAGGCCC AGTTATTATT 
GGTGGAGTCA GCGTTCCTTA TGAGCAAGGG TTAATTGCTC ATTCAGATGG TGATGTTGCA 
CTGCATGCAT TGTGTGATGC TTTGCTTGGT GCCATTGCGG AAGGAGATAT TGGTCGTCAT 
TTCCCTGATA CTGATGATAA ATGGAAAGGC GCCGATAGCA GAGCTTTGCT TAGAGATGTA 
TATCGTCGAG TTAAAGAAAA AGGCTTAGAG CTAGGGAATG CGGATGTCAC AATCATTGCA 
CAAGCCCCTA AGATGGCGCC TCATATTAAA CATATGTGCG CTGCTATTGC TGAAGATTTA 
GAAACAAGCT TGGATAATGT GAACGTCAAA GCGACCACGT CCGAGGGTTT AGGCTTTACT 
GGTAGAAAAG AAGGCATCGC TTGTGAAGCT GTGGTGCTGT TAGTTAAAAA ATCTTATTAA 

 

Protein sequence

MRIGHGFDVH KFGGEGPVII GGVSVPYEQG LIAHSDGDVA LHALCDALLG AIAEGDIGRH 
FPDTDDKWKG ADSRALLRDV YRRVKEKGLE LGNADVTIIA QAPKMAPHIK HMCAAIAEDL 
ETSLDNVNVK ATTSEGLGFT GRKEGIACEA VVLLVKKSY