Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2478 |
Symbol | |
ID | 6987775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2652761 |
End bp | 2653198 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643380744 |
Product | hypothetical protein |
Protein accession | YP_002263828 |
Protein GI | 209695898 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0202034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCAGG TTAGCCGTTC TGCATTAGTA CCTTTCAGTG CAAAGCAGAT GTATGATTTA GTCAATGATG TTGCGTCTTA TCCTCAGTTC TTACCCGGGT GCTCTGGTTC TAAGATCATA GAACAAACAG AATGTTCTAT GATAGCGTCG GTCGATGTAG CAAAAGCAGG CATAAAGAAG ACGTTTATTA CCGAAAATAC GTTAGTTGAT GCTCAAATCA TAGGAATGAA CTTGGTTGAT GGGCCTTTTA AATCATTAAC GGGTGGATGG CATTTTACTG AATTAGATGA AACGGCGTGT AAAGTAGAAC TAAAATTAGA TTTTGAATTT ACCAACGCGT TAGTAGCAAT GGCATTTGGT AAAGTTTTTC AAGAGCTTAC TAATAATATG GTGAATTCAT TTACCCAGCG AGCGAAGCAG ATTTATGTCA ATAATTAA
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Protein sequence | MPQVSRSALV PFSAKQMYDL VNDVASYPQF LPGCSGSKII EQTECSMIAS VDVAKAGIKK TFITENTLVD AQIIGMNLVD GPFKSLTGGW HFTELDETAC KVELKLDFEF TNALVAMAFG KVFQELTNNM VNSFTQRAKQ IYVNN
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