Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2470 |
Symbol | dnaJ |
ID | 6987771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2643549 |
End bp | 2644691 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643380736 |
Product | chaperone protein DnaJ |
Protein accession | YP_002263820 |
Protein GI | 209695890 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAC GTGATTTTTA TGAAGTATTA GGTGTTAGCC GTGATGCTTC TGAGCGTGAT ATAAAGAAAG CCTATAAACG TCTAGCAATG AAATTCCATC CAGACCGTAA TCAGGGTGAT GAAACTGCGC CAGAAAAGTT TAAAGAAGTA AAAGTTGCGT ATGAAATCCT AACTGATGCT CAAAAGCGTG CGGCATATGA TCAATACGGT CATGCGGCTT TTGAACAAGG TGGTATGGGT GGTGGCGGCG GCTTTGGCGG CGGTCAAGGT GACTTTGGCG ATATTTTTGG CGATGTGTTT GGTGATATTT TTGGTGGTGG CCGTCGTGGC GGTCAGCAAC GTGCACAACG TGGTTCAGAT TTACGTTACA ACATGGAACT TACGCTAGAA GAAGCGGTTC GTGGTTGTGA GAAAGACATT GAAATTCCAA CGTTAGCGGC CTGTGAACCA TGTGATGGAA CGGGCGCTAA AAAAGGGACT TCTTCAACAA CTTGTAGCAC GTGTCATGGT CAAGGCCAAG TTCAAATGCG TCAAGGCTTC TTTGCTGTGC AGCAGGCATG TCCTACTTGT CATGGTAAAG GTAAGATCAT TAAAGACCCA TGTAATTCTT GTCATGGCGA TGGTCGAGTA CAAAAGACAA AAACACTTAA CGTTAAGATT CCTTCTGGTG TAGATACGGG CGATCGCATT CGTTTATCTG GTGAAGGCGA AGCCGGAGAG CACGGCGCTC CAGCAGGCGA TCTATACGTA CAAGTTCATG TAAAAGAACA CAATATCTTT GATCGTGACG GTAACAACTT ATACTGTGAA GTGCCAGTAA GCTTTACGAT GGCTGCGTTA GGTGGTGAAG TTGAAGTCCC TACACTTGAT GGGCGTGTAA GCCTAAAAGT ACCACTAGAA ACACAAACGG GCCGTATGTT CCGTATGCGT GGTAAAGGGG TTAAAGGTGT TCGTACTCAC AGTGCGGGTG ACTTAATCGT TAAGTTAATT GTTGAAACTC CAGTTAAATT AACGAAACGC CAAAGAGAGC TACTTAAAGA ATTCCAAGAA TCATTTGATG GGAAAGATGC GAAGAAGCAC AATCCTAAAT CAGAAGGTTT CTTATCTGGT GTTAAGAACT TCTTTGATGA TTTAACTAAA TAA
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Protein sequence | MSKRDFYEVL GVSRDASERD IKKAYKRLAM KFHPDRNQGD ETAPEKFKEV KVAYEILTDA QKRAAYDQYG HAAFEQGGMG GGGGFGGGQG DFGDIFGDVF GDIFGGGRRG GQQRAQRGSD LRYNMELTLE EAVRGCEKDI EIPTLAACEP CDGTGAKKGT SSTTCSTCHG QGQVQMRQGF FAVQQACPTC HGKGKIIKDP CNSCHGDGRV QKTKTLNVKI PSGVDTGDRI RLSGEGEAGE HGAPAGDLYV QVHVKEHNIF DRDGNNLYCE VPVSFTMAAL GGEVEVPTLD GRVSLKVPLE TQTGRMFRMR GKGVKGVRTH SAGDLIVKLI VETPVKLTKR QRELLKEFQE SFDGKDAKKH NPKSEGFLSG VKNFFDDLTK
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