Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2419 |
Symbol | yaeT |
ID | 6987745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2587994 |
End bp | 2590414 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643380689 |
Product | outer membrane protein assembly factor YaeT |
Protein accession | YP_002263773 |
Protein GI | 209695843 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0333898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATGA AAAAATTGTT GATTGCTACA TTGCTTTTTA GCAGTGTAGC AGCACAAAGC GCAGAAACAT TTGTAATTGA TGATATACGC TTTGAGGGAT TGCAGCGTGT AGCATTGGGT GCTGCGCTTT TAAAAACACC AGTCCGTGTT GGCGATAGTA TGAGCCAACA AGATGTCTCT CAGGTAATTA AAGCTCTATT TGCCTCGGGT AACTTTGAAG ATGTAAAAGT ATTTCGTGAT GGGAGCACGT TACTCATTCG AGTAACTGAG CGTCCTACGA TTGCTAATAT TTCCTTTTCT GGAAATAAAG CAATTAAAGA AGAACAATTA CAACAAAATT TAGAAGCGTC TTCTGTTCGA GTAGGTGAGG CTTTAGATAG AACAACATTA AGTAACATAG AGAAAGGCTT AGAAGACTTC TACTATAGTG TTGGTAAATA CAATGCAACA GTGCACGCCA TTGTTACTCC GTTACCTCGA AATCGTGCTG ATTTAAAATT TGTGTTTACT GAAGGTGTTT CCGCTAAAAT TCAGCAAATT AACTTTATTG GAAATGAAGT CTTTACTGAT GAGCAGCTAT TAAGCCGTTT TAATCTAAAT GTTGATGTTG CTTGGTGGAA CTTTTTAGCG GATGAAAAGT ATCAGAAGCA GGTTTTAGCG GGTGATATTG AAGCATTACG TTCGTATTAC CTTGATCGTG GTTACTTAAA ATTCCAAGTA GACTCAACAC AAGTCTCAAT CTCTCCTGAT AAAAAAGGTG TGTATATCGC TTTAACCGTA AAAGAAGGTG AAGCTTATAC TGTCAATGGC GTTAAATTCC AGGGCGACCT TATTGGTAAA AAAGAAGAGT TTGAAAAACT GGTTACTTTT GAAGATGGTG ATGTTTATAA CGGCTCAGCA GTTACGCGTT TAGAAGAAAG TGTAAAGCGT ATTCTAGGTG AAGCGGGTTA TGCATACCCT AAAGTTCGAA CTATACCTGA ATTTGATGAT GAGAATCAGA CCGTATCTTT GGCTATAAAT GTTGAAGCGG GTAATCGCAT ATATGTGCGT GATATTAAAT TTGTTGGTAA CACATCAACA AAAGATGAAG TATTACGACG TGAAATGCGC CAGATGGAAA GTAGTTGGTT AAACTCTAAA TCTATTGAAA CGGGTAAAGC ACGTTTGAAC CGTCTAGGTT TCTTTGAAAC TGTCGATGTT CAAACCGTAC GTGTTCCTGG CTCTGATGAT CAAGTTGATT TAATTTATTC AGTTAAAGAA GCGAACTCAG GAAGTGTTAA CTTCGGTGTT GGTTATGGTA CTGAATCAGG CGTAAGCTTC CAAGTTGGTC TGCAACAAGA TAACTTCATT GGTTCTGGTA ACCGTGTTGG TATCAAAGCC ATGATGAACG ATTATCAAAA GAACATCAGT TTAGATTATC GTGACCCTTA CTGGAACCTA GATGGTGTCA GTCTTGGTGG TAAGATTTTC TATAATGAAT TTGAAGCCTC TAATGCTGGT ATCGTCGATT ATACCAACCA AAGTTACGGT GGTAATTTAA CGTGGGGTTT CCCATTTGAT GAATTAAACT ACTTTGAAAT TGGTGTCGGT TATACGCATA ACAAGATCTC TAATCTTAAA ATGTATATGC AGATTGAACA ATACTTGAAT TCGGTTGGTG AAGCTTATGA TGAAGCCGAT CAAACACTGA TTGTTAGTGA TTTTGATGTA ACATTATCAT GGACGCGTAA TAACTTGAAC AAAGGGTATT TCCCTACAGC AGGTAACTAC CAACGTGCTT CTTATCAAAT AACAACACCA AACTCAGATT CTCAGTTCTT TAAAGCACAA TATGAAGCTC GTCAATATTT CCCATTAACT AAGAAGCACG AGTTCGCTTT ATTAATGCGT GGTAAAGTTG GCTATGGTAA TGGTTATGGA CAGACCGACG GTAACGATAA CCTGTATCCA TTCTATGAGA ACTTTTACGC AGGTGGTTTT ACAACGTTGC GTGGTTTTGG TTCAAACTCA GCAGGACCAA AAGCGGTTTA TAATGAAAAC TCAGTAGGGA ATAACCCTAA TTATAAAGCA ACAGATGATT CTGTTGGTGG TAATGCAACC GCATTAGCAA GTATTGAGCT AATTGTACCA ACCCCATTTG CAAGTGAAGA GGCTCAAGGT CAAATACGTA CCAGTGTTTT CTTTGATATG GCAAGTGTGT GGGATACGGA ATTTGATTAT AAAGATCCAA AACCGGGTAT GGACGGCGCT CAGTATTATT ATGATTACTC TGATCCAACG AATTTCCGTT CATCTTATGG TGCAGCACTA CAATGGATGT CACCAATGGG GCCGTTAGTA TTCTCAGTTG CGAAACCAGT GAAGATTTAT GAAGGTGATG ATGAAGAATT CTTCAGTTTT ACCATCGGGC GAACTTTCTA A
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Protein sequence | MAMKKLLIAT LLFSSVAAQS AETFVIDDIR FEGLQRVALG AALLKTPVRV GDSMSQQDVS QVIKALFASG NFEDVKVFRD GSTLLIRVTE RPTIANISFS GNKAIKEEQL QQNLEASSVR VGEALDRTTL SNIEKGLEDF YYSVGKYNAT VHAIVTPLPR NRADLKFVFT EGVSAKIQQI NFIGNEVFTD EQLLSRFNLN VDVAWWNFLA DEKYQKQVLA GDIEALRSYY LDRGYLKFQV DSTQVSISPD KKGVYIALTV KEGEAYTVNG VKFQGDLIGK KEEFEKLVTF EDGDVYNGSA VTRLEESVKR ILGEAGYAYP KVRTIPEFDD ENQTVSLAIN VEAGNRIYVR DIKFVGNTST KDEVLRREMR QMESSWLNSK SIETGKARLN RLGFFETVDV QTVRVPGSDD QVDLIYSVKE ANSGSVNFGV GYGTESGVSF QVGLQQDNFI GSGNRVGIKA MMNDYQKNIS LDYRDPYWNL DGVSLGGKIF YNEFEASNAG IVDYTNQSYG GNLTWGFPFD ELNYFEIGVG YTHNKISNLK MYMQIEQYLN SVGEAYDEAD QTLIVSDFDV TLSWTRNNLN KGYFPTAGNY QRASYQITTP NSDSQFFKAQ YEARQYFPLT KKHEFALLMR GKVGYGNGYG QTDGNDNLYP FYENFYAGGF TTLRGFGSNS AGPKAVYNEN SVGNNPNYKA TDDSVGGNAT ALASIELIVP TPFASEEAQG QIRTSVFFDM ASVWDTEFDY KDPKPGMDGA QYYYDYSDPT NFRSSYGAAL QWMSPMGPLV FSVAKPVKIY EGDDEEFFSF TIGRTF
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