| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2398 |
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| Symbol | dnaQ |
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| ID | 6987737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2568079 |
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| End bp | 2568810 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643380669 |
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| Product | DNA polymerase III subunit epsilon |
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| Protein accession | YP_002263753 |
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| Protein GI | 209695823 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACTA GCGACAATTC CCCGAATAGA ATTATTGTTC TCGATACAGA AACCACCGGT
ATGAATTTAT CTGGCGGCCC TATTTATGAG GGTCACCGTA TAATTGAAAT TGGTGCGGTA
GAAATAATCA ACCGAAAATT AACTGGAAAT CATTTTCATG TATACATTAA GCCAGATCGA
CTGATTGATC TTGAAGCTAT TGATGTTCAT GGTATTACCG ATGAATTTTT GTATGGTAAG
CCAGAATATA AAGACATCCA TGATGAATTT TTAGCGTTCA TTAAAGGGGC TGAGCTTGTC
GCTCACAATG CACCCTTTGA TGTTGGGTTT ATGGATTATG AATTCAGTAA ACTTAACAAA
CTTATTGGTA CCACGGATCA GTATTGTAAG ATCACCGATA CCTTGGCCAT GGCGAAGAAA
ATTTCCCCTG GTAAGCGAAA TAATCTAGAT GTGTTATGTG GTCGTTACGG CATAGATAAC
TCGCATCGAA CGCTTCACGG CGCTTTACTC GATGCCGAAA TACTGGCAGA TGTTTATCTG
TTAATGACAG GCGGACAAAC CAGCTTAAGT TTCTCAGCAG GAGGAAATGA GTCTGATTCT
TCTGAAGAAA GTATTAATAG ATTGAATTTA GGACGAAAAG GATTAAAGGT TTTACGTGCA
ACGGCCGATG AATTAGAAGC GCATGAAAAG CGCTTGGATA TCGTTGGTGA TGCCTGTTTG
TGGCGTAATT AG
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| Protein sequence | MNTSDNSPNR IIVLDTETTG MNLSGGPIYE GHRIIEIGAV EIINRKLTGN HFHVYIKPDR
LIDLEAIDVH GITDEFLYGK PEYKDIHDEF LAFIKGAELV AHNAPFDVGF MDYEFSKLNK
LIGTTDQYCK ITDTLAMAKK ISPGKRNNLD VLCGRYGIDN SHRTLHGALL DAEILADVYL
LMTGGQTSLS FSAGGNESDS SEESINRLNL GRKGLKVLRA TADELEAHEK RLDIVGDACL
WRN
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