Gene VSAL_I2313 details

Gene Information

• Locus tag: VSAL_I2313
• Symbol: fliS
• ID: 6988511
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 2486631
• End bp: 2487041
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643380590
• Product: flagellar protein FliS
• Protein accession: YP_002263674
• Protein GI: 209695744
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGGCT CACTACAGGC ATATAAAAAG GTATCAATTG ATAGCCAATT AAGTGCTGCA 
TCACCTCATA AGGTCATTCA AATGTTGATG GCTGGTGCAA TTGAGCGCCT GATCCAAGGG 
AAAGCTGCAA TGCAACAGGG CAATACGGCT GTAAAAGGCG AGCGTCTTGG TAAAGCATTA 
GATATCGTAA TTAGTTTACG TTCTTGTTTA TCAATGGATG ACGGTGGTGA CATTGCGAGC 
AACCTAGATT CTCTGTATGA TTTTATGATC CGTCAAATTT CACAAGCAAA TCAAAATAAT 
GAAGCTCAAC CGATTGATGA TGTGGTTGAG ATGCTGCGTG AAATAAAATC CGCATGGGAC 
CAAATTCCGG CTGAATTTCA TAATTTGACA GCAGATCAAG TCGGAATATA A 

 

Protein sequence

MRGSLQAYKK VSIDSQLSAA SPHKVIQMLM AGAIERLIQG KAAMQQGNTA VKGERLGKAL 
DIVISLRSCL SMDDGGDIAS NLDSLYDFMI RQISQANQNN EAQPIDDVVE MLREIKSAWD 
QIPAEFHNLT ADQVGI