Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2306 |
Symbol | fliH |
ID | 6988540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2478202 |
End bp | 2478999 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643380584 |
Product | flagellar assembly protein H |
Protein accession | YP_002263668 |
Protein GI | 209695738 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCTCA GCAAAAAACG TGGTTTTATT CGTATTACCG ATGAGAGTGA ACTGCAAAAA ACAAATATTT GGCAATCTCC TGATTACTCT GATCCTGCAA ACCCTGCTCG TGAAACTGCA TTAAATTATG ACCCAAGCTG GACGCCGTCA TTACCGAAAG AAGAAGTGGC TGAAGAGTTT GTACTGACAG ATGAAATCAT CGAGCAGATC AAGCAAGGCG CTTATAATGA AGGGAAATTG GAAGGTCAAG AATTTGGCTA CAAAGAAGGG CTAGAAAAAG GCCAAGCAGA AGGTTTTGAA ACAGGTAAGC CTGAGGGCTA TCAAGTGGGT TATGAGGAAG GTATCGCAGC GGGACAAGCT GAGATCCAAG CGCGTATTCA ACAATTGATT GAAATGGCCG ATAAATTTTC TGAGCCGCTT GCCTTACTTG ATTCTCAAGT AGAAAAACAA CTTATCGACA TGGTATTGGC GTTAACTAAA GAAGTAACTC ATGTTGAAGT AAAAACCAAT CCTCAAATTA TTTTAGACAC GGTACGTGAA GCGGTAGAGA CTCTTCCCGT GACGGAACGA GAAATTAAAA TATCGTTAAA CCCTGAAGAT CACCAACGAG TGGTTGAGGC GTATGGCGAA GAAGCGTTAG CTCAAAAGCA ATGGACGTTA TCTATCGAGC CATCCATGAA TTTAGGCGAT ATTAACATTC AAGCGTTTGA CTCTAAAGTG AATTACTTGT TGGAAGAACG AATTAAAACC GTATTAACTA AGTTTTGTGG TGTGAATCGT CATCAAGGAA ATCAGTAA
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Protein sequence | MSLSKKRGFI RITDESELQK TNIWQSPDYS DPANPARETA LNYDPSWTPS LPKEEVAEEF VLTDEIIEQI KQGAYNEGKL EGQEFGYKEG LEKGQAEGFE TGKPEGYQVG YEEGIAAGQA EIQARIQQLI EMADKFSEPL ALLDSQVEKQ LIDMVLALTK EVTHVEVKTN PQIILDTVRE AVETLPVTER EIKISLNPED HQRVVEAYGE EALAQKQWTL SIEPSMNLGD INIQAFDSKV NYLLEERIKT VLTKFCGVNR HQGNQ
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