| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2279 |
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| Symbol | ccmC |
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| ID | 6988308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2453502 |
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| End bp | 2454254 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643380557 |
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| Product | cytochrome c-type biogenesis protein CcmC |
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| Protein accession | YP_002263641 |
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| Protein GI | 209695711 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGAAAT GGCTACATCC TTACGCTAAA CCAGAAAAAG CGTATCAATT AAGTACTACA
CTGCTACCAT GGTTTGCGGT GATCTCTATC ATCAGTTTGA CCGTTGGGAC CATCTGGGGC
CTTGCTTTTG CACCTTCTGA TTATCAACAA GGTGACAGTT TTCGAATTAT TTACATACAC
GTACCTGCTG CTATTTTGTC TATGGCCGCT TATATGTCGA TGGCGATAGC TGCTTTTATT
GGTTTGGTTT GGCAATTAAA ATTGTCTGAT ATGGCCGCGG CAGCAATGGC GCCTATTGGT
GCGGTATTTA CGTTCATCGC TTTACTTACT GGTGCCGTTT GGGGCAAACC TATGTGGGGT
GCTTGGTGGG TATGGGATGC CCGTTTAACG TCAGAATTAA TTCTTCTATT TTTATACCTA
GGGGTTATGG CCTTATATAA CGCGTTTGAT GATCAACGAA CCGCTGCTCG TGCTGCGGGT
ATTCTTGCTA TTGTTGGTGT GATTAATCTG CCAATCATTC ACTTCTCTGT CGAATGGTGG
AATACGCTTC ATCAAGGTGC AAGTATTACA AAGTTTGATA AACTTTCGAT TTCTTCAGAT
ATGTTGTGGC CTTTACTATT AAATATCATA GGCTTTGCAA CTTTCTTCGG TTCTGTGACT
CTTATTCGTT TTAGGAATGA AATTTTAGCA AAAGAGAGTC ATCGTCCTTG GGTTAGAGCA
TTGGTAGAGA CTAAATCTAC CGTCTCTAAA TAA
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| Protein sequence | MWKWLHPYAK PEKAYQLSTT LLPWFAVISI ISLTVGTIWG LAFAPSDYQQ GDSFRIIYIH
VPAAILSMAA YMSMAIAAFI GLVWQLKLSD MAAAAMAPIG AVFTFIALLT GAVWGKPMWG
AWWVWDARLT SELILLFLYL GVMALYNAFD DQRTAARAAG ILAIVGVINL PIIHFSVEWW
NTLHQGASIT KFDKLSISSD MLWPLLLNII GFATFFGSVT LIRFRNEILA KESHRPWVRA
LVETKSTVSK
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