Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2250 |
Symbol | |
ID | 6987674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2418879 |
End bp | 2420366 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380532 |
Product | transposase |
Protein accession | YP_002263615 |
Protein GI | 209695686 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.751402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGATA AAATAAAACC ACTTCCTGAT ACCATTGACG AGCTGAAAGC ACTTGTGCTT CAGCTTGAAA ATAAATATAA CCGTCTTCTA GAGCAATTTC GACTGGCTCA ACATCAGCGC TTTGGTAAAA GCAGTGAATC TGACTCGACT CAATTTGATT TATTCAATGA AACAGAAGAA GAAATCATCA TTGAAAATGA TGACACACAA ACGATTACCT ACACTCGTCA AAAGCCAAAA CGCCAACGCT TACCTGAAGA CTTACCGCGT ACTGTTATTA TCCACGACAT AAAAGATAAA ACTTGTAAGT GTTGCGGTCT AGAGATGCAT GCGATGGGTA AAGACATCAG TGAAAAGTTG GAATTTGTAC CAGCTAAAGT GGAAGTTATT CAACATGTTC GTCCTAAATA TGCTTGCCGA AATTGTGAAA AAAACAATAC TTCAGTAGAC ATTAAACAAG CCCCAATGCC AGCGTCACCA ATCCCTAAAG GGATTGCGAC CGCAAGTTTA CTTGCTCAAA TTATTACGGC TAAATTTCAA TACAGTCTTC CACTTTATCG TCAAGAAACG TTATTTCAGC AATGGGGTAT CATTATTGGA CGGCGAACGA TGGCGGATTG GTTAATAAAA TGCTCGGTAC TATTTACCCC TCTTAATAAC GAGTTACATC GTATTTTGCT TGAACAACCC ACTCTGCATT GTGATGAAAC AACGGTAAAT GTGTTGGATG TTGAAAAAGC AAAATGTTAT ATGTGGGTCT ACTGCTCTGG CTATGATTCT CCAGGCTCTG GTGTTTTGCC TGGAATTGTA TTTTATGATT ATCAATCTAG CAGGCATGGC TACCATCCAG TTAACTTTTT AAAAGGTTAT AACGGGTATT TACATACCGA TGGTTACCAA GGTTATGAAC AAACTGAAGC GATTTTAGTT GGCTGTTGGG CACACGCACG TCGACGATTT ATTGAGGCTC AACGTGTTCA AGTAAAAGGG AAAACAGGGA GTGCAGATTG GGTATTGAGT AAAATCCAAA AGCTATACCG GATCGAATCG TTATTAAAAG AGGCTTCCCC TGAAGCCAAG TATGTTGCTA GGCAGACAGA AGCCCGCGAT TTACTTAAAG AGCTCCGTGA TTGGCTTGAT AGCGCAGTTA GTCGAGTATC ACCTAAAACA AAATTAGGTG AGGCGATTAG CTATACATTA AATCAATGGG ATAAATTAGT TCGTTATATT GATGATGGAT TGTTATCTAT TGATAACAAT CGAGCAGAGC GAGCGGTTAA ACCGTTTGTT ATCGGCCGGA AAAACTGGTT ATTTTCGGGT TCAACGGCTG GTGCAGATTC AAGTGCAATG CTTTACAGCA TTGTAGAAAC AGCAAAGGCA AACGGATTAA TCCCTTACGA TTATATTAGG TATTGTCTAG ATCGTTTATG TGTTGGATCG CCAGATATCG ATTCACTTTT ACCTTGGAAT GTAAAAGACA AGGTGTAG
|
Protein sequence | MIDKIKPLPD TIDELKALVL QLENKYNRLL EQFRLAQHQR FGKSSESDST QFDLFNETEE EIIIENDDTQ TITYTRQKPK RQRLPEDLPR TVIIHDIKDK TCKCCGLEMH AMGKDISEKL EFVPAKVEVI QHVRPKYACR NCEKNNTSVD IKQAPMPASP IPKGIATASL LAQIITAKFQ YSLPLYRQET LFQQWGIIIG RRTMADWLIK CSVLFTPLNN ELHRILLEQP TLHCDETTVN VLDVEKAKCY MWVYCSGYDS PGSGVLPGIV FYDYQSSRHG YHPVNFLKGY NGYLHTDGYQ GYEQTEAILV GCWAHARRRF IEAQRVQVKG KTGSADWVLS KIQKLYRIES LLKEASPEAK YVARQTEARD LLKELRDWLD SAVSRVSPKT KLGEAISYTL NQWDKLVRYI DDGLLSIDNN RAERAVKPFV IGRKNWLFSG STAGADSSAM LYSIVETAKA NGLIPYDYIR YCLDRLCVGS PDIDSLLPWN VKDKV
|
| |