Gene VSAL_I2228 details

Gene Information

• Locus tag: VSAL_I2228
• Symbol: udk
• ID: 6987663
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2395269
• End bp: 2395916
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643380510
• Product: uridine kinase
• Protein accession: YP_002263593
• Protein GI: 209695664
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0572] Uridine kinase
• TIGRFAM ID: [TIGR00235] uridine kinase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGAGA ACAGTAATCA TCACTGTATT ATCGTAGGTA TTGCAGGGGC ATCCGCTTCA 
GGCAAAAGTC TGATTGCTTC TACTATTTAT AATGAACTAC GAGCAAAAGT TGGCGACCAC 
CAAATTGGCG TAATAACTGA AGACAGTTAC TACAAGGACC AAAGCCACCT GACCATGGAA 
GAAAGAGTCA AAACTAATTA TGATCACCCA AATGCATTAG ATCATCGATT ATTGAGTGAA 
CATCTTGAAC AATTGATGCG TGGTGAAGCT GTTAACATCC CAACATACAG CTATACAGAG 
CACACTCGAA CATCAGATGT TGAAGTAATG ACACCTAAAA AGGTTATTAT TCTTGAAGGT 
ATTTTATTAC TAACTGATCC TAGATTACGT AATTTGATGC ATGCAAGTGT GTTTATGGAT 
ACGCCATTAG ATATTTGTTT ATTACGTCGT GCTAAGCGTG ATGTTGAAGA ACGTGGTCGT 
TCAATGGAAT CGGTATTTGA ACAATACCAG AAGACTGTCC GCCCAATGTT CATGCAATTT 
ATTGATCCAT CAAAGCAACA TGCCGATATT ATTGTCCCTC GTGGCGGTAA AAACCGTATC 
GCTATTGATG TACTAAAAGC GCATATTTCA AGATTATTGA AAGCGTAA 

 

Protein sequence

MSENSNHHCI IVGIAGASAS GKSLIASTIY NELRAKVGDH QIGVITEDSY YKDQSHLTME 
ERVKTNYDHP NALDHRLLSE HLEQLMRGEA VNIPTYSYTE HTRTSDVEVM TPKKVIILEG 
ILLLTDPRLR NLMHASVFMD TPLDICLLRR AKRDVEERGR SMESVFEQYQ KTVRPMFMQF 
IDPSKQHADI IVPRGGKNRI AIDVLKAHIS RLLKA