Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2206 |
Symbol | |
ID | 6988701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2371466 |
End bp | 2372983 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643380488 |
Product | SpoVR family protein |
Protein accession | YP_002263572 |
Protein GI | 209695643 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.193374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA AAAGTAGGTT ACCTGATGGG CCAGATTGGA CCTTTCAAAC CTTAGAACAA TACCATGTTG AAATTAAGCG CGTTGCGGAG TATTACCGTT TAGATACCTA CCCTAACCAA ATTGAGATCA TCACCGCTGA ACAAATGATG GATGCGTATT CTAGTGTTGG GATGCCCATT AATTACCATC ATTGGTCATT TGGAAAAAAA TTCATTCAAA CCGAACAGAA TTATAAGCAT GGCCAAATGG GCTTAGCTTA TGAAATTGTC ATCAACTCCT CCCCTTGCAT CTCTTATCTT ATGGAAGAAA ATACCATTAC GATGCAAGCA TTAGTGATGG CACATGCTTG TTATGGGCAT AACTCTTTCT TTAAAGGGAA TTATTTATTT CAAACATGGA CTGATGCGAG CTCAATAGTC GATTATCTAC TTTTCGCTCA GCAATACATT ACTCAGTGTG AAGAAAAGCA TGGCGTTGAT GAGGTAGAGG CCATTCTAGA TTCTTGTCAC GCACTCATGA ACTATGGCGT AGATAGATAC AAACGCCCTG AAAAAATATC CATTGCAGAA GAAAAAATTC GTCAAGAAGA CAGAGAGGCT TACCTTCAGT CACAAGTAAA TGACCTATGG CGAACCGTTC CAAAAACCAA GCAAGAAAAC AACGAAGAAA AAGAAAGATT CCCCTCTGAG CCACAAGAAA ATATTCTGTA TTTTATTGAA AAACACGCAC CATTATTAGA ATCGTGGCAA CGGGAATTGG TCAGGATTAT TCGTAAGATA AGTCAATATT TTTATCCACA AAAACAAACA CAGGTAATGA ATGAAGGATG GGCAACATTT TGGCATTACA CTATTTTAAA TCATCTTTAC GATGAAGACT TAGTGTCCGA TAAATTCATT TTAGAATTTT TACATAGCCA TACCAATGTA GTGGCGCAAC CAAGCTATAA CAGCCCTTAT TATAGTGGGA TTAACCCTTA TGCATTAGGG TTTGCTATGT TTCAAGATAT TCGCCGTATC TGTGAAGAGC CCACAGATGA AGATAGGGAA TGGTTCCCAG ATTTAGCAGG AAGTGATTGG TTAGACGCCG TTCATTTTGC GATGCATAAC TTCAAAGATG AAAGTTTCAT AAGCCAGTAT TTATCACCTA AATTAATACG TGAATTTAAA TTATTTGCCA TATTAGACGA TGATAAAAGT AAACACATTG AGATTAGTGC TATTCATGAC GATGTCGGTT ATCGAGAGAT TCGAGAAAAG TTAGCTGCTC AATACAATTT GAGTAATTTA GAACCGAATA TTCAAGTATG GAATGTGGAT GTAAGAGGTG ACCGTTCATT AATATTAAGG CACGTCCCAC ACAATCGAAT TCCTTTAGAT AAAGGCCACC AAGAAGTAAT GAAGCACTTG CATCGTTTGT GGGGGTTTGA TGTGATATTA GAAGAGGTTA TTTCATTTAA CCGGGCAGAA ATCATTTCAT CTTGTCCAAA GCGTAATTAT TACAATACCA CGATTTAA
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Protein sequence | MNKKSRLPDG PDWTFQTLEQ YHVEIKRVAE YYRLDTYPNQ IEIITAEQMM DAYSSVGMPI NYHHWSFGKK FIQTEQNYKH GQMGLAYEIV INSSPCISYL MEENTITMQA LVMAHACYGH NSFFKGNYLF QTWTDASSIV DYLLFAQQYI TQCEEKHGVD EVEAILDSCH ALMNYGVDRY KRPEKISIAE EKIRQEDREA YLQSQVNDLW RTVPKTKQEN NEEKERFPSE PQENILYFIE KHAPLLESWQ RELVRIIRKI SQYFYPQKQT QVMNEGWATF WHYTILNHLY DEDLVSDKFI LEFLHSHTNV VAQPSYNSPY YSGINPYALG FAMFQDIRRI CEEPTDEDRE WFPDLAGSDW LDAVHFAMHN FKDESFISQY LSPKLIREFK LFAILDDDKS KHIEISAIHD DVGYREIREK LAAQYNLSNL EPNIQVWNVD VRGDRSLILR HVPHNRIPLD KGHQEVMKHL HRLWGFDVIL EEVISFNRAE IISSCPKRNY YNTTI
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