Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2193 |
Symbol | |
ID | 6987651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2355915 |
End bp | 2358008 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380475 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_002263559 |
Protein GI | 209695630 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAT CAATAAAAAC ACGTATCGCG GTAAGTGCCG GACTTGCCAT CTTTATAACA TTAAGCACCG CCATGTTTTT TACTACCGTA TCTTATAACG GAGTAAATAA AGAAATAACA AAACATGTCT CTGACCAACT CGCTGAAAAT ATTGATTATA AATTACTGTC TATTGCGAAT CAGCAAAGTG CGGAACTCAA TGGTCAATTT TCCCCAGTGA TCAGTAACTT AAAACAACTA AAATCATTGC TAGAACTGTC AAACCAACAC CAAGCAGACG CAAGTCTTCT TATTGAGCAG TTCATCTCAT CATTAAAAAT ACAAAATGAC AGTGTATTTG CAGGTTACAT GGTGTGGGAA GACGCTAATT TTACTAAAGA TGAATCGGTT CTTACTCAAA AAGCATTAAA TAAAGAAGGC GTTCTATCTC CATTCTTCTC TCCGACCAAT TCAGGCTTTG AAGCCATTGG AATGGACCGC TTTAAAAACA CCGCGTTAAA CAACAATGGT GAACGTACTG ATGAATGGCA TTTAGCGCCT TTTGAAACGG GTAAAAGCTT TGTAATGGAA CCTTACTATT ACAACGTAAG AGGAAATGAA GAGCTTATTA CGACGATCAG TTTGCCGTTA CGACATAACA ATAAGATTGT TGGTTCTCTT GGTTTTGACT GGTCAATAAA AAGCTTCCAA GCAATAAGTC AAAAATCAGC AAAAGCAACA GGAATGCCTG ATGCGATTGT CTCTATCGCC TCATGGGACG GACGATTACT ATCTTTCAGT AAAGATGGAA GTTTAGTCGG TCAAAAAGTA GCAGATGAAT TTGCACGTAA TTGGGGATCG ATTCAGCAAG AAGCGAAAAA TAATAAGTCA TTCTTAAAAG ACATCGGCCA TTTGAAAATT GCTGTCTCTA CCATTAATAC AGGGGCAAAA CCGTGGATAG TCATGGTGTC GATTCCTTCT GAAATTTTGA AAAAAGAAAT TACCGATTTC AATGTGTTCA GCACTGAATT AGGAAGCGAA GCACTTTCTA ATGGTTTATT AAGTGGCGTC ATCTCTTCAA TTGTTGGTAT TTTTATTATT TTCCTTCTGG CAAAAAATAT TGGTTCAACA CTGTCTAATC TCACGACTCG CTTTGAAAAC ATAGCTCAAG GTGATGGCGA TTTAACACAG CGCATTGAGA TAGACTCTAA AGACGAAATT GGCCAGTTAG CTTTTTGGTT TAATACTTTT GTAGAGAAAA TTCAACTCAC TCTTCATAAC GCCAAGAACA CCGCTGAATT GGTGTCTCAA TCATCAATGA ACACCATGTC TGAAACTGAA AAATCACAAA TTAAGCTGCA AAATCAAGTG AATGAAGTGA CCCAATTAGC AACGGCGATT AATGAAATGA GTGCAACGGC TCAAGAAGTT GCGTCTTCTG CTTTGCAAGC GGCAACCGCT GCAAACCAAA TTCAAACAAG CAGTGAAGAT GGTCAAAAAA TAATGAATAA CGCCGCCTCT TCAGTAGAAG AGTTAGCCGC ATTCATCAAT GAAGCTCAAT CACAAGTCGT TAGCTTAGCC GCATCAAGCA ATGATATTCA AAAAATTCTA ACGGAAATCG GCAGCATTGC TGAGCAAACA AATTTATTGG CTCTGAATGC CGCGATTGAA GCAGCTCGTG CTGGTGAGCA AGGCCGTGGA TTTGCAGTCG TCGCTGATGA GGTGCGTAAC CTTGCAAGTC GTACGCAAAG CTCAACTCAA GAAATCAACA GCATGCTTGT AATATTGCAG CAAAATACAC AAGGCATTGT CACCGTAATG GACAGTAGCC AGAAACAAGC GCTAGCAACC AAAGAAGACA CATTAATTGC ACAACAAAAC TTAATTGAAA TAAGTAATGC AATCCTTGTG GCAAATGACA TGAACAATCA AATTGCTTCT GCCGCTGAAG AGCAAAGCTC GGTTTCTGAA GAGATAAATC GCAATGTAAC CAGCATTAAT GAAGCCGCTG ATGAGGTTCT TGCTGATATG CATACCTCAC TCAATGATAC GGCAGAACTA ACAAGAGAAA GTCATGAATT AGCACAAAGG CTGAGTGAGT TTAAAACTCA ATAA
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Protein sequence | MFKSIKTRIA VSAGLAIFIT LSTAMFFTTV SYNGVNKEIT KHVSDQLAEN IDYKLLSIAN QQSAELNGQF SPVISNLKQL KSLLELSNQH QADASLLIEQ FISSLKIQND SVFAGYMVWE DANFTKDESV LTQKALNKEG VLSPFFSPTN SGFEAIGMDR FKNTALNNNG ERTDEWHLAP FETGKSFVME PYYYNVRGNE ELITTISLPL RHNNKIVGSL GFDWSIKSFQ AISQKSAKAT GMPDAIVSIA SWDGRLLSFS KDGSLVGQKV ADEFARNWGS IQQEAKNNKS FLKDIGHLKI AVSTINTGAK PWIVMVSIPS EILKKEITDF NVFSTELGSE ALSNGLLSGV ISSIVGIFII FLLAKNIGST LSNLTTRFEN IAQGDGDLTQ RIEIDSKDEI GQLAFWFNTF VEKIQLTLHN AKNTAELVSQ SSMNTMSETE KSQIKLQNQV NEVTQLATAI NEMSATAQEV ASSALQAATA ANQIQTSSED GQKIMNNAAS SVEELAAFIN EAQSQVVSLA ASSNDIQKIL TEIGSIAEQT NLLALNAAIE AARAGEQGRG FAVVADEVRN LASRTQSSTQ EINSMLVILQ QNTQGIVTVM DSSQKQALAT KEDTLIAQQN LIEISNAILV ANDMNNQIAS AAEEQSSVSE EINRNVTSIN EAADEVLADM HTSLNDTAEL TRESHELAQR LSEFKTQ
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