| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1999 |
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| Symbol | nrfC |
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| ID | 6988916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2141077 |
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| End bp | 2141763 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643380296 |
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| Product | cytochrome c-type biogenesis protein NrfC |
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| Protein accession | YP_002263385 |
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| Protein GI | 209695456 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR03149] cytochrome c nitrite reductase, Fe-S protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTTGTT CTAGACGAAA TTTTTTAGCG GGCTCGGGTG CGGTTATCTT TACTACCGGA
GTCGCAACTA CGTCATTAAT CAGCAGTAAA AAAACGCTGG CTTATTCGAT GGAAGATGGT
GCAAAACGTT ATGGTATGGT CCATGATGAG ACGGCTTGTA TTGGTTGTAC TGCCTGTACC
GAAGCGTGCC GTGAAGTGAA CAGTGTGCCT GAAGGCGTTT CTCGATTAGA GATTATCCGT
AGCGAACCGC GCGGAGAGTT CCCTGATGTC GATTATCGCT TTACGCGTAA GTCATGCCAA
CACTGTGAAA ATGCACCTTG TGTAATGGTG TGTCCAACAG GCGCTGCTTA TAAAGACGAA
GCAACTGGTA TTGTCGATGT CCATAACGAG AAATGTGTAG GGTGTGGCTA CTGTTTAGCG
GCGTGTCCTT ATCAAGTACG TTTCTTTAAC CCTGTTACTA AATCTGCAGA TAAATGTGAT
TTTTGTCGAG AGACGAATTT AGCTCAAGGT AAACAGCCTG CGTGTGTTGA ATCGTGTCCA
ACAAAAGCAC TGATCTTTGG TGACTTGAAC GATAAAAACA GTGAGATTAA TGCGGTATTA
AGCAATAGCG TATTTTATCG AGACAAAGTG GATCTAGGCA CTAAGCCTAA GTTATTTAAG
ATCCCAAACC AAAGAGGGGA GATTTAA
|
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| Protein sequence | MSCSRRNFLA GSGAVIFTTG VATTSLISSK KTLAYSMEDG AKRYGMVHDE TACIGCTACT
EACREVNSVP EGVSRLEIIR SEPRGEFPDV DYRFTRKSCQ HCENAPCVMV CPTGAAYKDE
ATGIVDVHNE KCVGCGYCLA ACPYQVRFFN PVTKSADKCD FCRETNLAQG KQPACVESCP
TKALIFGDLN DKNSEINAVL SNSVFYRDKV DLGTKPKLFK IPNQRGEI
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