Gene VSAL_I1998 details

Gene Information

• Locus tag: VSAL_I1998
• Symbol: nrfB
• ID: 6988915
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2140482
• End bp: 2141075
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643380295
• Product: cytochrome c nitrite reductase pentaheme subunit
• Protein accession: YP_002263384
• Protein GI: 209695455
• TIGRFAM ID: [TIGR03146] cytochrome c nitrite reductase, pentaheme subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAAAG TTAATTTAGC CATGGCCACA ATGTTGAAGC TACTCTTCGC ATTTTGTCTC 
TGTGGTTTGT CTCTTAATGT TGCAGCAGAT GAATCGCCCC AAATTGAGGC TAATTCATCG 
ACGCCATATG AAGTGACGTT AATTCGTGAC CGCGACTACG CATGTACTCA ATGTCATAAA 
GACGAAAAAG AAACACTCAA AGGATCACAC GGAGAAGATG CATTTGCCAT TCTTAAACGT 
GATGTGAACT GTGTTGAGTG TCATAAATCA ATTGGGCCTG ATCACCGAGA AGGCGCACCT 
CAAGTAACCA AATATTCTGC AGCACAATCA AAAACAGGCA CGGAAAAAGT GATCCTTTCG 
TTTGATGAAA TTTTACAAGC TAATAGCCAG TGTATTGATT GCCACACTTC AGAAGATTTA 
CGTGATGATA GCTGGACGCA TGACGTTCAC GCTAAAAATC TAACCTGTTC ATCTTGTCAT 
ATTGTACATG GAGAAAAAGA AGCGGTACTT TCTTTTGATC ATTCCTCAAA GATAAAGATG 
TGTGTTGACT GCCACGCTGA TTTTAATCAG AAAGAAAATA AGCTAGGAGA ATAG 

 

Protein sequence

MGKVNLAMAT MLKLLFAFCL CGLSLNVAAD ESPQIEANSS TPYEVTLIRD RDYACTQCHK 
DEKETLKGSH GEDAFAILKR DVNCVECHKS IGPDHREGAP QVTKYSAAQS KTGTEKVILS 
FDEILQANSQ CIDCHTSEDL RDDSWTHDVH AKNLTCSSCH IVHGEKEAVL SFDHSSKIKM 
CVDCHADFNQ KENKLGE