Gene VSAL_I1996 details

Gene Information

• Locus tag: VSAL_I1996
• ID: 6987502
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 2137799
• End bp: 2138452
• Gene Length: 654 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643380293
• Product: putative formate-dependent nitrite reductase complex NrfG subunit
• Protein accession: YP_002263382
• Protein GI: 209695453
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4235] Cytochrome c biogenesis factor

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TACAAAAATA TGATAATTAT GATGTTGTGT AGTTTTGTTC TTATCGCCGC CGTATTGTGG 
TGGTTTTTTA GCCGTGGTAA TGCGACGTCT TTAAATCCGG CATGGATGAT TTTTGTGGTT 
GTAGTGAGTA TGATAGTTGT TTTTTCATCA GGCTTAAAAC CAGAAAAGTA CGCGGTTGAT 
AATACCTTAA TTACTGAACC TCTAGGTCCA TTGTCGTATA GCGACAAAAT GAGACATTTA 
GAAGACCAGC TTAAAGAATC ACCAAATAAT GCGGACTTAT GGTTTGAAAT CGGGCAAGGT 
TATTTACTTA ATGGTGAATT GAAACCAGCC AATATTTGTT TTGATTATGC GATTCGATTA 
ACTGAGGAGC CAACTGCAAA CCAATACGCA GCAAAGGCAA CGACTCAATA TTATTTACAT 
TCTCAATTAC TTGATGAAGA AATTGAAACA TTACTCGATA AAGCGTTAGC GTTAGATGAA 
TACAATCAAG CGGCTTTAAC GTTAATTGCT TCTGATCATT TTGTAACTTT CCGTTATCAA 
AAAGCAATCA ATGCATGGCA AAAGATTTTA GATTCTGAAC GTGTTGATGT AGACAGAGTG 
ACAATTATTA ATTCGATTAA CCAAGCTAAG CAATTAATGC AAGCACGTCG TTAA 

 

Protein sequence

MIIMMLCSFV LIAAVLWWFF SRGNATSLNP AWMIFVVVVS MIVVFSSGLK PEKYAVDNTL 
ITEPLGPLSY SDKMRHLEDQ LKESPNNADL WFEIGQGYLL NGELKPANIC FDYAIRLTEE 
PTANQYAAKA TTQYYLHSQL LDEEIETLLD KALALDEYNQ AALTLIASDH FVTFRYQKAI 
NAWQKILDSE RVDVDRVTII NSINQAKQLM QARR