| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1984 |
|---|
| Symbol | torD |
|---|
| ID | 6989044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2125988 |
|---|
| End bp | 2126635 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643380281 |
|---|
| Product | chaperone protein TorD |
|---|
| Protein accession | YP_002263372 |
|---|
| Protein GI | 209695443 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.240109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC TAAATGCATT TAATGAACAA CGTGCTGAAA TTTATTGGTG GTTATCTAGC
CTATTTGCAC ACGAGCTAAC TAAAGAGCAA TTAGAGCAGT ATAACAGTTT TGAGATTCGT
ACCTTTTTAA CGAACCTTTC TGAAACTCCA GAGCTAACCG ACTCTATTTC TTCAATTGTA
ACAAAATTGA ATGAATTACA AACACGCGAA GATGCACAGC TTGAACTATC GGCTGACTTC
TGTGAAGCGT TCTTAGGCTC TGATAAGAAC AGTGCGCTTC CTTATGCTTC AATGTATTTA
GATAAATCAC GCCTTCTTAA TGCGAAACCA GCACAAGATA TGCGTGATTT ATTAGAAAAA
TACAACATCA CTCAAAAAGC TGAATTCAAT GAACCTGCGG ATCACATTGC TATTGAGTTA
GATTTCTTAG GCAATCTAAT TGTCATGACG AATCAGCAAA CAACGGAACC AGAATTCGAG
CAATTCATGG CCGCACAACT GCAATTTATT AACGAACAGT TATTATCTTG GGCGCCACGT
TTTAACCAAC TTTGTTCTGA ACGAGATACA TTTGGCTTCT ATGCTGCCGT TACTCACTTC
CTTGTTACGT TCTTAGAATT GGATGTAAAA TTCCTAGCGG GCGAATAA
|
|---|
| Protein sequence | MNELNAFNEQ RAEIYWWLSS LFAHELTKEQ LEQYNSFEIR TFLTNLSETP ELTDSISSIV
TKLNELQTRE DAQLELSADF CEAFLGSDKN SALPYASMYL DKSRLLNAKP AQDMRDLLEK
YNITQKAEFN EPADHIAIEL DFLGNLIVMT NQQTTEPEFE QFMAAQLQFI NEQLLSWAPR
FNQLCSERDT FGFYAAVTHF LVTFLELDVK FLAGE
|
|---|
| |