Gene VSAL_I1968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1968 
SymboltesB 
ID6987480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp2111094 
End bp2111957 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content43% 
IMG OID643380265 
Productacyl-CoA thioesterase II 
Protein accessionYP_002263356 
Protein GI209695427 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.517331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC CACTTAATGA ATTATTAACC CTGTTGCAAT TAGAGCAACT CGAACAAGGG 
CTATTTAGAG GACAAAGCGA GAACCTAGGC TTACCTCAAG TATATGGTGG TCAAGTCGTT
GGACAGGCTT TATCGGCCGC TCGCTATACC GTTGATAACG CCAGAACAGT GCATTCTTTT
CACAGCTATT TCCTTTATCC TGGCGATCCT GAAAAAGCCA TCATCTACGA TGTAGAAAAC
CTACGAGATG GCAGAAGTTT CAGCACTCGT CGAGTGAAAG CCATTCAAAA TGGTCGCCCT
ATTTTCTATT TAACGGCGTC TTATCATGGT GATGAACCTG GATTTGAGCA TCAATCAAAA
ATGCCAGAAA TTGCGGGCCC TGAAAACTTC GCCTCTGAAA CTCAACTTGC AGAAGCAATT
AAGCACGTAC TTCCACCTCA AATACAAAAA ATATTCTGCA GCGAAAAACC GATCGAAGTT
CGCCCAGTAA ATATCATTAA TCCATTAGCC CCTAAAAAAG CAGCGCCAAC ACAACATTTA
TGGATCAAAG CCAATGGTGA TTTACCTGAT ATCCAGTTGA TCCATCAATA TATATTGGCT
TATGCGTCTG ATTGGGGATT CTTAACGACG GCACTTCACC CGCACGAAGT CAGCTTGCTC
ACTCCCAATT TTCAAGTGGC AACCATTGAT CATTCAATGT GGTTCCACCG CCCATTCAAA
ATGGATGAAT GGTTGCTTTA CTCAATTGAA AGCACCAACG CCAGCGGTTC TCGTGGCTTA
GTTCGTGGCG AGATATTCAA CCAAAAAGGC GAACTTGTGG CATCTGCAAT GCAAGAAGGC
TTAATGAGAA TGAAAAACAA ATAA
 
Protein sequence
MNKPLNELLT LLQLEQLEQG LFRGQSENLG LPQVYGGQVV GQALSAARYT VDNARTVHSF 
HSYFLYPGDP EKAIIYDVEN LRDGRSFSTR RVKAIQNGRP IFYLTASYHG DEPGFEHQSK
MPEIAGPENF ASETQLAEAI KHVLPPQIQK IFCSEKPIEV RPVNIINPLA PKKAAPTQHL
WIKANGDLPD IQLIHQYILA YASDWGFLTT ALHPHEVSLL TPNFQVATID HSMWFHRPFK
MDEWLLYSIE STNASGSRGL VRGEIFNQKG ELVASAMQEG LMRMKNK