| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1965 |
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| Symbol | |
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| ID | 6987477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2108585 |
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| End bp | 2109268 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643380262 |
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| Product | queuosine biosynthesis protein QueC |
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| Protein accession | YP_002263353 |
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| Protein GI | 209695424 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
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| TIGRFAM ID | [TIGR00364] exsB protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.681821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTACAG CTATTGTTGT TTTTAGTGGC GGTCAAGATT CGACCACTTG TTTAATTCAA
GCACTTACCC ATTATGATCA TGTTCATTGT ATTACTTTTG ATTATGGCCA ACGTCATAAT
CAAGAAATTG AAGTAGCTAA ATCTGTCGCT TTAGACTTAG GGGCAACCTC TCACAAAGTC
ATGGATGTGG GTTTATTAAA TGAATTGGCC GTCAGTTCGT TAACTCGCGA TAACATACCG
GTTTCTCATG AACTGCAAGA GAATGGTTTA CCGAATTCAT TTGTTCCTGG TCGTAATATT
TTATTTTTAA CTCTTGCTGG TATTTATGCA TACCAATTAG GTGCAGAAAG CGTTATCACG
GGCGTATGTG AAACTGACTT TTCTGGTTAC CCTGATTGTC GAGATGAATT TGTAAAATCG
ATTAATCAAT CTCTTGTATT AGGAATGGAT CGTAAACTAA AAATCGATAC TCCTTTAATG
TGGCTAAATA AAGCGGAAAC GTGGGCATTA GCCGATAAGT ACGGCAAGTT AGATTATGTT
CGTAATCAAA CATTAACGTG CTATAACGGC GTTATTGGTG ATGGCTGTGG TGATTGCCCA
TCATGTGACT TACGCAAAAA TGGTTTAGAC GACTATTTAG CAAATAAAGA ATCAGTAATG
GCTGACTTAG AGTCAAAAAT TTAA
|
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| Protein sequence | MSTAIVVFSG GQDSTTCLIQ ALTHYDHVHC ITFDYGQRHN QEIEVAKSVA LDLGATSHKV
MDVGLLNELA VSSLTRDNIP VSHELQENGL PNSFVPGRNI LFLTLAGIYA YQLGAESVIT
GVCETDFSGY PDCRDEFVKS INQSLVLGMD RKLKIDTPLM WLNKAETWAL ADKYGKLDYV
RNQTLTCYNG VIGDGCGDCP SCDLRKNGLD DYLANKESVM ADLESKI
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