Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1952 |
Symbol | |
ID | 6987472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2090451 |
End bp | 2091623 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380247 |
Product | hypothetical protein |
Protein accession | YP_002263341 |
Protein GI | 209695412 |
COG category | [S] Function unknown |
COG ID | [COG2850] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAAT TAAGCTTTTC ACTACAAGAA TTTCTCTCGG AATATTGGCA GAAAAAACCC GTCATCATCA AAGGTGGTTT TGAGAACTTT CAAGATCCAG TCACACCTGA AGAATTAGCA GGTTTAACAC TAGAAAACGA AGTGGACTCA GGCTTTGTTT CTAACTTAAA TGGCGAATGG AAAGCAGAAC ACGGCCCATT AACTGAAGAA CTATTTGATA CACTGGGCGA AACTAACTGG TCTATTATCG TTCAAGCCGC TAACCATTGG CATGAAGGTG CAGCTGAGTT GTTTAAACCA TTTAAACAAA TGCCAAATTG GTTATTTGAT GATGTAATGA TCAGCTATTC AGTACCCGAT GGTGGCGTAG GCCCGCACAT TGATCAATAT GATGTTTTTA TTATTCAAGG CCAAGGTAAG CGTCATTGGC GTGTGGGTGA TATCGGCGAA TACGAAGAAG AACATCGTCA TGGTACATTA AAGCAAATTA CAGGTTTTGA TCCGATCATT GATCAAATCT TAGAACCGGG TGATATTCTT TATATTCCAC CAGGCTTTCC ACACGATGGC TACGCACTAG AGCCATCAAT GAGTTACTCT GCCGGCTTCC GCTCTCCAAA AGAACAAGAG CTAGTGAGTA ATTTTGCGGA TTTCATTATT GAAAATGAAA AAAATGATGT GCATTACCAT AATCCAGATC TTAAAGCGCA AACACATGGC ACAGAGATCA CCACACAAAG TTTTGAAGAT TTAAAAGCCA TGATGCTAAA TGCGTTGTCG GATGAACAGA GCCTTAAGCA ATTTATGGGA GAGTATTTAA GTAACTCTCG CCATCATTTG AACATTTTGC CTGATACTGA GAAGTGGACA ACAGAAGAGT TATTGGCTTA TCTACAATCA GGTCAAGCTC TGATTAAAGT GGCCGGTGTT CGTGCTTTCT ATCATGAAGA AGAAGCATGT GAAGACAACA TGACACTTTA TATTGATGGT GAGAGCTATG TGTTCCCACT AACAGTAAAA GAGGATGTGA TTGCTTTATG TGAATCATCA GAATTTACAC TACTTGATAT TGAGAACTTA CTGCAAGATC CGCACTCAGT GGCTAACCTG CTGCAATTTG TCAACACAGG TTACTGGTTC GTAGAATCAG ACGAAGACGA AGACGAAGAA TAA
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Protein sequence | MYQLSFSLQE FLSEYWQKKP VIIKGGFENF QDPVTPEELA GLTLENEVDS GFVSNLNGEW KAEHGPLTEE LFDTLGETNW SIIVQAANHW HEGAAELFKP FKQMPNWLFD DVMISYSVPD GGVGPHIDQY DVFIIQGQGK RHWRVGDIGE YEEEHRHGTL KQITGFDPII DQILEPGDIL YIPPGFPHDG YALEPSMSYS AGFRSPKEQE LVSNFADFII ENEKNDVHYH NPDLKAQTHG TEITTQSFED LKAMMLNALS DEQSLKQFMG EYLSNSRHHL NILPDTEKWT TEELLAYLQS GQALIKVAGV RAFYHEEEAC EDNMTLYIDG ESYVFPLTVK EDVIALCESS EFTLLDIENL LQDPHSVANL LQFVNTGYWF VESDEDEDEE
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