Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1918 |
Symbol | |
ID | 6987454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2051215 |
End bp | 2052375 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380219 |
Product | MFS transporter |
Protein accession | YP_002263313 |
Protein GI | 209695384 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000771845 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACACAA CAACATCAAC TCAATCACAA TCTGGTTTAT TCGTTCCAGT GATTGCACTT TCTTTATTTG CTATAGCATC TGGGTACTTA ATGAGTCTTA TCCCATTGAT GTTAAGTCAA TATGGAATGG AGGCGAAATA CGCCAGTTGG TTAGCAAGTG CTTTCTATGC AGGCCTATTA GTTGGCGCAG GGCTAATTGA ACCTTTTGTT GCTCGTCTTG GTCACAAAAA TGCATTTGTA TTATTCTTAG CATTACTTGC TGCAACTATC GTGATCTTAC CTGTAGCCCC TGTTGAGTGG GTATGGATGA CTCTTCGTTT TGTGGCTGGT ATTGCGGTTG CAGGCGTTTT TGTTGTTGTT GAATCTTGGC TGCTTATTGG TGACGCTGAA AGTCGTCCAA AACGCTTAGG TTTATACATG GGTGCTTTAT ACGGTGGTTC ATCTTTAGGT CAACTGGGTA TCGGTTTTAT TGGTATTGAA GGGTTACTTC CTTATTACAT GATCATTGGC TTACTTATGA TGGCTATTGC ATGCTTACTG TTTGGTAAAG GTGCTCAGCC CCAAGTTCAG CATCATAATG TATTAAACCT AAAACAAATT TTAAAACTAA ACAAAGCGTC GATTATGGGC TGTGTTGTTT CTGGTTTATT ACTCGGTGCA GTTTATGGAC TGATGCCTCT AGAACTAAAA CACCGTAATA TTAATATCAC TCAAATTGGC AGCTTAATGG CGTTGATTGT TTTAGGTGGA ATGGCAGTTC AACCATTAGT TTCGTACTTA TCTCGACACT TAGGGAAAAC ATTATTGATG GCATTATTCT GCGTGCTGGG CGTTTTTGCT ATTGGATTAA CTACGCTAAG TGACCATGCT GCCGTTCTAG CAACCTCATT GGTGCTTCTA GGTATGGCCG CTTTTGCTAT TTATCCTATT GCTATCTCTT TGGGTTGTGA TCAGTTGGAT GAGTCTTACA TTGTTTCAGC AACACAAGTA ATGCTATTTA GCTATAGCAT TGGTTCTGTA TGTGGCCCTG TATTAGCAAA TACACTAATG AACACTGCTG AAGGTTTAAT GAGCTATTTA TTCGCCATTC TACTAGCGAC CGCTATTTAT ATGTTACTAG CGAGTATGCG CCAACAGCGA CCAATGGTTG CTGGTGAATA A
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Protein sequence | MNTTTSTQSQ SGLFVPVIAL SLFAIASGYL MSLIPLMLSQ YGMEAKYASW LASAFYAGLL VGAGLIEPFV ARLGHKNAFV LFLALLAATI VILPVAPVEW VWMTLRFVAG IAVAGVFVVV ESWLLIGDAE SRPKRLGLYM GALYGGSSLG QLGIGFIGIE GLLPYYMIIG LLMMAIACLL FGKGAQPQVQ HHNVLNLKQI LKLNKASIMG CVVSGLLLGA VYGLMPLELK HRNINITQIG SLMALIVLGG MAVQPLVSYL SRHLGKTLLM ALFCVLGVFA IGLTTLSDHA AVLATSLVLL GMAAFAIYPI AISLGCDQLD ESYIVSATQV MLFSYSIGSV CGPVLANTLM NTAEGLMSYL FAILLATAIY MLLASMRQQR PMVAGE
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