Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1899 |
Symbol | pal |
ID | 6989304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2032865 |
End bp | 2033422 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643380200 |
Product | peptidoglycan-associated lipoprotein precursor |
Protein accession | YP_002263295 |
Protein GI | 209695366 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.640623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTAA ATAAACTTCT TAAGAGTCTT TTAATCGCGC TGCCAGTGGT TGCTCTTTCT GCTTGTAGTT CTAGCGATAG CGCAACTGAT AGTACTGCTG GTCAAGAATC AACAAACGGA ACAGAAACAA CAAGCGGTAC TGCTGGTGAA GGCCAAACAG ATACAACGGT TGTTACTGTA GTTGAAGGTG AAGAAGTTCT AACTGAGCAA GAAGTTAAAG AACAAGCTTT ACGTCAAGTT CAGACTGTTT ACTTCGCTTT TGATAACTCA ACTATTTCTT CAGAGTATGA AGATATGCTT GCAGCTCACG CGGCTTTCTT AAGCAAAGCG CCTGAAGTTA AAGTAACCGT TGAAGGCCAT GCTGACGAAC GTGGTACTCC TGAGTACAAC ATCGCACTAG GCGAACGTCG TGCTAATGCA GTTGCTAAAT ACCTACAAGC TTTAGGTGTT TCTGCAGACC AAATCTCTAT CGTAAGCTAC GGTGAAGAAA AACCTCTAGT TCTTGGCCAA ACAGCTGAAG ACTACGCTAA AAACCGTCGT GCAGTATTAG TATACTAA
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Protein sequence | MQLNKLLKSL LIALPVVALS ACSSSDSATD STAGQESTNG TETTSGTAGE GQTDTTVVTV VEGEEVLTEQ EVKEQALRQV QTVYFAFDNS TISSEYEDML AAHAAFLSKA PEVKVTVEGH ADERGTPEYN IALGERRANA VAKYLQALGV SADQISIVSY GEEKPLVLGQ TAEDYAKNRR AVLVY
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