Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1888 |
Symbol | ruvA |
ID | 6989218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2023519 |
End bp | 2024139 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380189 |
Product | Holliday junction DNA helicase RuvA |
Protein accession | YP_002263284 |
Protein GI | 209695355 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.949715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGGAC GCCTTCGTGG AAATCTATTA GAAAAACAAC CACCAGAATT ACTCATTGAA GTCAGTGGTA TTGGTTATGA AGTTCAAATG CCAATGAGTT GTTTTTATGA ATTACCACCG ATTGGTACCG AAGCCATTAT CTATATTCAT TATGTAGTAC GTGAAGATGC TCAATTACTT TACGGTTTTA ATACTAAAAA AGAACGAGCG TTATTTAGAG AAGTGATCAA AGCTAACGGG GTGGGGCCAA AACTTGGTTT GGCGATACTG TCTGGCATGA CTGCTTCTCA ATTTGTTCAA AGTGTTGAGC GTGAAGATAT TTCGACCTTA GTCAAATTAC CAGGTGTTGG TAAAAAAACG GCAGAGCGTT TAGTCGTAGA GATGAAAGAT CGCCTAAAAG GGTGGGGAGC GGGTGACTTA TTTACTCCAG CAGACACTAC GTCAATGGAT GATGCTTCTG ATTTGATTTC ATCGCCTCAA AGCGCACAAG ATGAAGCAGT CAGTGCGCTT ATTTCTTTAG GCTATAAACC AGTGCAGGCG TCTAAAATGG TATCTCAAGT CGCAAAACCT GATATGACCA GTGAATCTCT AATTCGTGAA TCATTGAAAT CAATGATCTA A
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Protein sequence | MIGRLRGNLL EKQPPELLIE VSGIGYEVQM PMSCFYELPP IGTEAIIYIH YVVREDAQLL YGFNTKKERA LFREVIKANG VGPKLGLAIL SGMTASQFVQ SVEREDISTL VKLPGVGKKT AERLVVEMKD RLKGWGAGDL FTPADTTSMD DASDLISSPQ SAQDEAVSAL ISLGYKPVQA SKMVSQVAKP DMTSESLIRE SLKSMI
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