Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1886 |
Symbol | aspS |
ID | 6987436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2021027 |
End bp | 2022802 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643380187 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_002263282 |
Protein GI | 209695353 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAGCC ATTACTGTGG TAACTTGAAC AAGTCCCTTG CAGGACAAAC TGTAGAACTT TGCGGCTGGG TAAACCGTCG CCGTGATTTA GGCGGTCTTA TCTTCATTGA TATGCGAGAT CGTGAAGGTG TCGTTCAGGT AGTTGTTGAC CCAGATATGA AAGATATCTT TTCAACTGCT AACCAACTGC GCAATGAATT CTGTATTAAA TTTACTGGCG AAGTACGTGT TCGTCCTGAC AGCCAAGTAA ATAAAGATAT GTCTACGGGT GAAGTTGAAC TTTACGCGAC AGGTCTTGAG ATCATCAACC GTTCTGAAGC ACTTCCATTG GATTTCAATC AAACGAACTC AGAAGAGCAA CGCCTGAAGT ACCGTTATAT TGATTTACGT CGTCCAGAAA TGAGTGACCG TATCAAGTTA CGTGCTCGTG CATCTAGCTT TGTTCGTCGT TTCTTAGATG AGAACCTATT CTTAGATATC GAAACACCAG TACTAACAAA AGCAACGCCA GAAGGCGCTC GTGATTACCT AGTACCAAGC CGTGTTCATA AAGGCAGCTT CTACGCACTT CCACAATCAC CACAGTTGTT TAAGCAACTT CTGATGATGT CTGGTTTTGA CCGTTACTAC CAAATCGTTA AATGTTTCCG TGATGAAGAT TTACGCGCTG ACCGCCAACC TGAATTTACT CAAATAGATA TCGAAACCTC TTTCCTTTCG TCTAACCAAG TTCGTGATAT TACTGAACGT TTGGTTCATG ACATGTGGAA AGAACTTCTT GATGTTGAGC TTGGTCAATT TCCAATAATG AAATTCTCTG AAGCGATTCG TCGTTTTGGT TCTGATAAGC CAGATCTACG TAACCCACTA GAATTAGTGG ACATTGCAGA TCTTCTTAAA GACGTAGAAT TCCAAGTATT CGCTGGTCCT GCAAATGACG AAAAAGGCCG TGTAGCGGTT ATTCGTGTTC CTGGTGGCGC ATCGCTTTCT CGTAAGCAAA TTGATGAATA CGGCAAATTT GTTGGTATTT ACGGCGCGAA AGGCCTTGCT TGGATGAAAG TAAACGATCG TGCTGCTGGT CTTGAAGGAG TTCAATCTCC TGTTGCTAAA TTCCTAAACG CAGACGTTGT AAATGGTATT TTAGAACGCA CAGAAGCTGA AAGTGGCGAT ATCATCCTAT TTGGTGCAGA TAAAGCAAAC ATTGTTTCTG AAGCCATGGG TGCATTACGT ATCAAGCTTG GTGATGACTT AGAACTAACA GACAAAAAAG CATGGGCACC TCTTTGGGTT ATTGATTTCC CAATGTTTGA AGAAGATGGC GAAGGTAACT TGCATGCAAT GCACCACCCA TTTACTTCTC CATTAGGCAT GACAGCGGAA GAGCTTAAAG TAAACCCTGC TGCTGCAAAC TCTGATGCTT ACGATATGGT TATCAACGGC TATGAAGTTG GTGGTGGCTC TGTACGTATT CACAATGCTG AAATGCAAAC TGCAGTATTC GGTATCCTAG GTATTGAAGC GAAAGAGCAA CAAGAGAAAT TTGGTTTCTT ACTTGAAGCG CTTAAATACG GTACGCCGCC ACACGCAGGT CTTGCTTTCG GTCTTGACCG TCTTGCAATG CTACTTTGCG GTACTGAAAA CATTCGTGAC GTTATTGCAT TCCCTAAAAC AACGGCTGCA GCATGTTTAC TTACGAATGC TCCAAGCCCT GCGAATCCAG ATTCTCTTGC AGAATTAGCG ATTGCAGTAA AATTTGCTGA GAAAAAAGAC GCTTAA
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Protein sequence | MRSHYCGNLN KSLAGQTVEL CGWVNRRRDL GGLIFIDMRD REGVVQVVVD PDMKDIFSTA NQLRNEFCIK FTGEVRVRPD SQVNKDMSTG EVELYATGLE IINRSEALPL DFNQTNSEEQ RLKYRYIDLR RPEMSDRIKL RARASSFVRR FLDENLFLDI ETPVLTKATP EGARDYLVPS RVHKGSFYAL PQSPQLFKQL LMMSGFDRYY QIVKCFRDED LRADRQPEFT QIDIETSFLS SNQVRDITER LVHDMWKELL DVELGQFPIM KFSEAIRRFG SDKPDLRNPL ELVDIADLLK DVEFQVFAGP ANDEKGRVAV IRVPGGASLS RKQIDEYGKF VGIYGAKGLA WMKVNDRAAG LEGVQSPVAK FLNADVVNGI LERTEAESGD IILFGADKAN IVSEAMGALR IKLGDDLELT DKKAWAPLWV IDFPMFEEDG EGNLHAMHHP FTSPLGMTAE ELKVNPAAAN SDAYDMVING YEVGGGSVRI HNAEMQTAVF GILGIEAKEQ QEKFGFLLEA LKYGTPPHAG LAFGLDRLAM LLCGTENIRD VIAFPKTTAA ACLLTNAPSP ANPDSLAELA IAVKFAEKKD A
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