Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1885 |
Symbol | |
ID | 6987435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2019787 |
End bp | 2020515 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380186 |
Product | putative methyltransferase |
Protein accession | YP_002263281 |
Protein GI | 209695352 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | [TIGR00740] methyltransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACC CAGATACTAT ATTTTCAGCT CCAATCGATA AAATTGGTGA CTTTACCTTT GACGAACGTG TCGCAGAAGT ATTTCCAGAT ATGATTCAAC GTTCAATTCC AGGCTACAGC AACATTATCT CTGCTATTGG TATGCTTGCT GAACGTTACG CTAAACCTCA TTCAAGTGTT TATGATTTAG GTTGCTCACT GGGTGCGGCA ACGTTATCTA TGCGTCGTCA CATTAATCAA GAAGGCTGTC AGATTATTGG AGTCGATAAT TCCTCAGCAA TGGTCGAACG TTGTCGTTTA CTGATTAACG CTTATCGTTC AGATACACCC GTAACCATTG TTGAAGCGGA TATCCGTGAT GTCAATATTC AAGATGCATC GGTCGTCGTA TTAAATTTTA CTTTGCAATT TTTAGTGCCA GCCGATCGTA GAGCCCTATT GGAGAAAATC TATTCTGGAT TACGTCCCGG TGGCATTCTT ATTTTATCTG AGAAATACAT CTTCGAAGAT GGTGTCGTTA ACGAGTTATT GATCGATTTA CATCATGATT TCAAACGTGC TAATGGCTAT AGTGAATTAG AAATAAGCCA AAAGCGCAGC GCCATTGAAA ATGTCATGCT GCCAGATCCA ATTGATGTTC ACAAACAACG TTTTCAAGAG ATTGGCTTTA AAAGCTCTGA AGTCTGGTTC CAATGCTTTA ATTTTGGCTC AATGTTCGCG ATCAAATAA
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Protein sequence | MANPDTIFSA PIDKIGDFTF DERVAEVFPD MIQRSIPGYS NIISAIGMLA ERYAKPHSSV YDLGCSLGAA TLSMRRHINQ EGCQIIGVDN SSAMVERCRL LINAYRSDTP VTIVEADIRD VNIQDASVVV LNFTLQFLVP ADRRALLEKI YSGLRPGGIL ILSEKYIFED GVVNELLIDL HHDFKRANGY SELEISQKRS AIENVMLPDP IDVHKQRFQE IGFKSSEVWF QCFNFGSMFA IK
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