| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1819 |
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| Symbol | |
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| ID | 6987398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1943870 |
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| End bp | 1944973 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643380123 |
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| Product | outer membrane protein A |
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| Protein accession | YP_002263220 |
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| Protein GI | 209695291 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00533384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATAA CTTATCTATT ACATATAGAT GATAACATTA GTCGTAATAA TGTAAGTATG
TGTGAATTAT TGGTTATGAA GAAGATATCG TATTGTATTT TAAGTTTGGG TATTGCATGT
AATGCTAGTG CAAATACCAA TACCGAAGAT GAAACCATCT ATATTGGTGG CAAAATCGGT
TGGACTCATT TTTCTAATGG TTGTGAATCA CAAAATTTAG ATTGTGATAA AGAAGCTATG
GGGGGAGGTG TTTTTCTTGG TTATAAACTA AATGAATGGC TTGCAATTGA AGGTGGGTAT
GATTATTTAG GTAAAGCGAA AGCGATTTAC CCAAGTCTTG ATGACCCTTC TATTGATGCT
CCTTATAGCG CAAAGTTTCA AGGTATAGAG TTAGGACTTA AGGCTGACTA TTATTTAAAT
GATAATTGGA ATGTTTTTGG CAAAGTTGGT GGCCTTGGAT GGAGAGCAGA TAAGAAAGGA
GAAGAATTAA ACTATGACGT TGAAGGACGG GATCAAGATA TTTCGTTAAT GCTTGGGGCT
GGCCTTGAGT ACCGTTTAAC TAAACAGTTA AAAACTCGAT TTGAATATCA ATGGTTTGAT
AGTGTTGGTG GTGAAAATAC AGGTGGTTCA AATATTAATT TTATTACGAT TGGCTTGACT
TATTCTTTTG GTTCAAAAGA GGAAGTAGTC GTTATTGCCG AGCCTGATCC ACCAGTACGT
ATTGTTAAAG CAGAAAAACT TACCCTTAAT GAGCTGAATG GACAAGCTTT GTTTGGCTTT
GATAGTGCTA AATTATCTTC AGAAGTAGAA GCCCATTTTG ATTCAATTTT AGAAAGACTT
AAAAACAACC CAACATCGGA ATTAAGTATT GTCGGTCATA CGGACTCTCA AGGTTCAGAT
AAATACAATG AAGGGTTATC TTTGAGACGA GCACAGAGTG TTGCTAATTA CTTTGAAAGC
AATGGTATTG CAATGAGTCG AATCAAAGTT GAAGGTCGAG GTGAGACCGA TCCTGTTGCC
GATAATAACA CGCTAAAAGG GCGATCAATG AACCGTCGTG TTGATTTAAT TTCTCCTGCT
TTTACTTCAG AGGTTAAACC ATGA
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| Protein sequence | MHITYLLHID DNISRNNVSM CELLVMKKIS YCILSLGIAC NASANTNTED ETIYIGGKIG
WTHFSNGCES QNLDCDKEAM GGGVFLGYKL NEWLAIEGGY DYLGKAKAIY PSLDDPSIDA
PYSAKFQGIE LGLKADYYLN DNWNVFGKVG GLGWRADKKG EELNYDVEGR DQDISLMLGA
GLEYRLTKQL KTRFEYQWFD SVGGENTGGS NINFITIGLT YSFGSKEEVV VIAEPDPPVR
IVKAEKLTLN ELNGQALFGF DSAKLSSEVE AHFDSILERL KNNPTSELSI VGHTDSQGSD
KYNEGLSLRR AQSVANYFES NGIAMSRIKV EGRGETDPVA DNNTLKGRSM NRRVDLISPA
FTSEVKP
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