Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1728 |
Symbol | |
ID | 6988263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1839456 |
End bp | 1839938 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380043 |
Product | putative nucleotide-binding protein |
Protein accession | YP_002263142 |
Protein GI | 209695213 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.499513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCTT TTGATATCGT TTCTGAAGTT GATAATGTTG AACTAAAAAA TGCAGTAGAT AACGCTACTC GTGAATTAGC TACTCGTTTC GATTTCCGTG GTGTTGATGC TAGCTTTGAA TTGAAAGGCG AAAACATCAA GATTAAAGCG GAAGATGACT TTCAGCTAAC GCAACTTGTT GATATTTTAC GTGGTAACCT TGCGAAACGT GGCGTTGATG CACGTTCAAT GGATGTAAAA GACGCGGTTC ACTCTGGTAA AAACTTTTAC CAAGACATCG ACTTTAAACA AGGTATTGAT CCTCTTATCT CTAAGAAATT AGTGAAAGAA ATCAAAGCAT CAAAAGTTAA AGTTCAAGCC GCTATCCAAG GTGAACAATT ACGTATTACG GGTAAAAACC GTGACGACCT TCAAGCTGCA ATGGCTATAG TTCGTGAAGG TGACTTTGGT CAACCATTCC AATTCACTAA CTTTCGTGAC TAA
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Protein sequence | MPAFDIVSEV DNVELKNAVD NATRELATRF DFRGVDASFE LKGENIKIKA EDDFQLTQLV DILRGNLAKR GVDARSMDVK DAVHSGKNFY QDIDFKQGID PLISKKLVKE IKASKVKVQA AIQGEQLRIT GKNRDDLQAA MAIVREGDFG QPFQFTNFRD
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