Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1614 |
Symbol | malY |
ID | 6988779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1721143 |
End bp | 1722312 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379944 |
Product | cystathionine beta-lyase |
Protein accession | YP_002263044 |
Protein GI | 209695115 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.475755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACTT TCTCTGAGCA AATCAATCGT AAAGGCAGTT ACTGCACTCA ATGGGATTAC GTTGCTGACC GATTCGGTGA AGCGGACCTT CTGCCATTTA CCATATCGGA TATGGATTTT TCAGCACCAC CTGTGGTTAT GAACGCACTG AAATCACGAA TGGAACATCC TGTATTTGGT TATAGCCGTT GGGATCACAG TGATTTCAAA GGGGCGATTA CACATTGGTT TAAACGTCGA TTTAATGCTG AATTTGATGG GAAGGACCTG GTTTACGGAC CTTCTGTTAT TTACATTATT TCGCAATTAA TCCGTCAATG GAGTAGTGCC AGTGAAGGGG TTATTATTCA TACACCGGCT TATGATGCCT TTGACAAAAT GATTTTAGGA TTAGAACGAA CCATTATTCC AAATCAATTA TCGCCTTCTT CAGAAGGGTA TCAAATTGAT TGGAATGTAT TTGAAGCTCA ATTATCTGAT CCTAATAACA CGGTTTTATT GCTGTGCAGC CCTCATAATC CAACAGGCAA AGTCTGGAGT GCTGATGAGT TGAAACGCAT GGCGGTTCTT TGTGAAAAAT ACCATGTGGC AGTGATCAGT GATGAGATCC ACATGGACAT CTGTTTTAAA CCTCATACGC CTTGGCAAGG ATTTGGAATG GGGACTCGTT GGGCCTTAGT CAGTTCTGCA TCAAAGTCAT TTAATATTCC TGCGCTTAAT GGGGCTTATG CCTTTATTGC TGATGATGTT GCAAGAGAAC ATTATTTATT TAACCTTAAA CAAGTGGATG GGCTTTCTTC ACCTTCTATT CTTGGTGTTA TTGCTCTTAT GGCGGCTTAT CAAGAAGGTG GACCGTGGCT TGATGAATTA AAGTCATACT TATATGAAAA TCATCGTTAC GTTCAAGAGA CATTAGAGAA AGAGCTACCA AGTATTGGTT ATCAAATTCC CGATTCTACT TATCTTGCAT GGATTGATCT TTCTTCTTTT TCGTTAGATA TGGATGCATT AAATCAATGC TTAATTAAAA ATCATAAAGT TGCCATCATG CAAGGCAGTA CTTACGGGGT TGCAGGAAAA GGTTTTGTGA GACTTAACCT AGGCTGTCCG CGCATAAAAG TGGAAAAAGG CTTATCTGCG CTCATTTCTG CAATTAAAGA GCAATCTTAA
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Protein sequence | MFTFSEQINR KGSYCTQWDY VADRFGEADL LPFTISDMDF SAPPVVMNAL KSRMEHPVFG YSRWDHSDFK GAITHWFKRR FNAEFDGKDL VYGPSVIYII SQLIRQWSSA SEGVIIHTPA YDAFDKMILG LERTIIPNQL SPSSEGYQID WNVFEAQLSD PNNTVLLLCS PHNPTGKVWS ADELKRMAVL CEKYHVAVIS DEIHMDICFK PHTPWQGFGM GTRWALVSSA SKSFNIPALN GAYAFIADDV AREHYLFNLK QVDGLSSPSI LGVIALMAAY QEGGPWLDEL KSYLYENHRY VQETLEKELP SIGYQIPDST YLAWIDLSSF SLDMDALNQC LIKNHKVAIM QGSTYGVAGK GFVRLNLGCP RIKVEKGLSA LISAIKEQS
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