Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1570 |
Symbol | |
ID | 6987205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1681553 |
End bp | 1682227 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643379902 |
Product | membrane protein |
Protein accession | YP_002263002 |
Protein GI | 209695073 |
COG category | [S] Function unknown |
COG ID | [COG2836] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.403322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGTG ATTTTATTGG TGCGTTTATT ATTGGTTTAA TGGGCGCAGG ACACTGCATT GGTATGTGCG GAGGAATATC GGCTGTAATA TCAATGGGTT CAGATGGTAA TAAATACCCT AGATGGTGCT TTATCTTATT ATATAACCTT GGAAGAATAA GTTCTTATGG TATTTTCGGG TTTATTGTTG GTGGGATATT TGTATCTATT GCACAAACAA GCTCAAGTTA TAGTGCGCTA GTTTACTTGC GGGTGTTTGC TGGCATAATG ATGTGTCTGT TAGCGCTATA CATCGCTAAT TGGTGGAAAG GCATTGTTTA CATTGAAGTA ATAGGGAAAA AATTATGGCA ATTTATCTCC CCTTTAACAA AACCATTATT ACCTTTAAAA TCCCCTTTCC ATGCTATTCC ATTTGGATTT TTATGGGGGT GGTTACCTTG TGGATTAGTC TATTCAACAC TCACTTGGGC CGCGGTTTCA GGAAGTGCTC TCAATGGCGC ATTGGTTATG ATGGCATTTG GTTTAGGTAC CTTACCTGCC ATGTTTCTTG TTGGTATTGG TGCTCAAACC CTAAAAACAT GGCTAAATCA TAAACTAACC CGAAACGTAG GGGGTTTATT GCTTTTAGCT TATGGACTTC AAACGATATA TGTTGCGCTA GATCAACTCC GCTAA
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Protein sequence | MNSDFIGAFI IGLMGAGHCI GMCGGISAVI SMGSDGNKYP RWCFILLYNL GRISSYGIFG FIVGGIFVSI AQTSSSYSAL VYLRVFAGIM MCLLALYIAN WWKGIVYIEV IGKKLWQFIS PLTKPLLPLK SPFHAIPFGF LWGWLPCGLV YSTLTWAAVS GSALNGALVM MAFGLGTLPA MFLVGIGAQT LKTWLNHKLT RNVGGLLLLA YGLQTIYVAL DQLR
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