| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1560 |
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| Symbol | |
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| ID | 6987197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1671140 |
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| End bp | 1673233 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643379892 |
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| Product | response regulator, histidine kinase |
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| Protein accession | YP_002262992 |
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| Protein GI | 209695063 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0213368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATAAAG TGAAGGACTA CACGGAAAAA GAACAGCTTC AGGAAGCATT ATTAGAATTA
AAACGGAGTA AAGAAAGAGA GGCGCATTTA TACAAAGAAA ATGAAGCTAT TTTAAGTGGG
TTATCTGCTA TCTCTGATGC TCAAACCAAG CAGGATATTT TTAATGAATT ACTTGATGTC
GTTAAAAAAT TTGTTCCCTT CGACAACGCC ATCGTTTTAT CTTCTTCTTC TGAAGTTGAA
CAATTTACAG TTTTAGCCTC GACTAATGAG CGGTTTAATT CATTAGCATG GGAATATAAC
GATTTATTTG ATCGCGCTTG TCATAATGAG AGTATTGTCC TTTTTAGTCC TTGTGATAAT
CCACACTTTT CATTTATCCC AAAACACATC CAATCTGATT TTGAATCTAT ATCTTTAACT
GGTATTAAAT CCCATTCTGG TTATGCCATT ATTATGCTAA TGAGTTCTAC ATTTGGCATG
TATTCATCTT CGACTAAAGA AAAAATGCAG CGATTCATTC CTTTAGTTGA GCGTGCGATT
ATAGATATTG ATTACAAAGA CAGATTGCAT TCATTAGTTA ATATTAAAAC CAAAGAATTG
CATTTAAGTA ATGATCGTTT TAAAGACTTT GCAGAATCTG CGGGGGATTG GTTTTGGGAG
ACTGATTTAG GTTTTAATTT TACTTATATT TCAGACTCTA CCATTAAAAC CATTGTTATC
ACAGATCGTA ATTTATTAAC TCTAATCAAT GATAACCCAA CAACATCTCA AATTTTATCT
TCAAAATCAA TGGTTAAGTC ATTTGATGAA CTAGAATGGT GGCCATCTAT ATTTAAGCAA
CAGGTTTGCA TGAGCATTAG TGGTACTCCT TATTTTGATG ACGCTGGACA ACTCATTGGT
TACAGAGGAA CAGCTAAAGA TATATCAATA AGAAAAAAAC GGCTTCAACA AATACAAAAA
GCGAAACAAG AAGCTGAAAC TGCCAACAAA GCTAAATCTC AATTTTTAGC TATGATGAGC
CATGAAATAA GAACACCATT GAATGCAATC CTTGGTATGG TTGATGTATT TAACGAAAGT
CTTCTATCGA AAGAACAATA CGAATGGCTT GATCAGATGG AGGTTTCAGC ACAACTTCTT
CTGGCTATTA TTAGTGACGT TCTTGATATA TCTAGGATAG AAGCTGGGAC CTTTGTTTTA
GATGAACAAC CAATAGATTT ATTAGAAACT ATTATTAATT CAACGAATTA CTTCAAGGAA
AAGAGTAAAG ATAAAGGAAT AAATTTAACT GTTACGGTGT CACATAGTGT GCCTAACTAC
GTAATAGCAG ATGCAGCAAG AATCATGCAG ATCATATTTA ACTTAGTTGG TAACGCTGTT
AAATTCACCA AAAAAGGATC TATATGGATA AATATCACAC AAACAGAGTG TAATTCAACC
AAGATAGCCA TCACGGATAC AGGAATTGGT ATATCCAAAG ATGTATTAAA TAACTTGTTC
CAGCCATTCG TACAAGCAGA CAGCTCAATT ACTCGTCAAT TCGGTGGTTC TGGACTTGGT
TTATCTATAA TAAAACGACT TACTGAACTA ATGAATGGTG TTATTTCGGT TAAAAGTGTC
ATTAATGAAG GCAGTACTTT TACCGTAACA TTACCATTTA AAGAAACGAA AGAATGTCCA
AAACGTATTA CTTTAAATAA TAATGACGTG ACTGATAAAT CAACTCGAAC ACTGAATATT
CTTATTGCTG AAGACAGCAA AGCAAATCAA GCGGTCATTC AATTACTTCT TGAAGGTCAA
GGACATCAAA TAACATTAGT CGATAATGGA TGCATGGCGG TTGAAGCGAT AGAAAACAAA
AATCAGAACT TCGACCTAAT TTTAATGGAT GTATCTATGC CAATAAAAGA TGGCATCAGT
GCGACAAAAG AAATTAGAGC TAAAGGTTAT AATTTACCAA TCTTAGCATT AACAGCACAT
GCTATGAATG AAGAAAAGAA AACATGTATA GATGCTGGTA TGAATGATTT CATTTCGAAA
CCAGTACGAG CACAAGAATT AAAATTGATC TTAGATTCAT TAAAGCTTGG CTAA
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| Protein sequence | MHKVKDYTEK EQLQEALLEL KRSKEREAHL YKENEAILSG LSAISDAQTK QDIFNELLDV
VKKFVPFDNA IVLSSSSEVE QFTVLASTNE RFNSLAWEYN DLFDRACHNE SIVLFSPCDN
PHFSFIPKHI QSDFESISLT GIKSHSGYAI IMLMSSTFGM YSSSTKEKMQ RFIPLVERAI
IDIDYKDRLH SLVNIKTKEL HLSNDRFKDF AESAGDWFWE TDLGFNFTYI SDSTIKTIVI
TDRNLLTLIN DNPTTSQILS SKSMVKSFDE LEWWPSIFKQ QVCMSISGTP YFDDAGQLIG
YRGTAKDISI RKKRLQQIQK AKQEAETANK AKSQFLAMMS HEIRTPLNAI LGMVDVFNES
LLSKEQYEWL DQMEVSAQLL LAIISDVLDI SRIEAGTFVL DEQPIDLLET IINSTNYFKE
KSKDKGINLT VTVSHSVPNY VIADAARIMQ IIFNLVGNAV KFTKKGSIWI NITQTECNST
KIAITDTGIG ISKDVLNNLF QPFVQADSSI TRQFGGSGLG LSIIKRLTEL MNGVISVKSV
INEGSTFTVT LPFKETKECP KRITLNNNDV TDKSTRTLNI LIAEDSKANQ AVIQLLLEGQ
GHQITLVDNG CMAVEAIENK NQNFDLILMD VSMPIKDGIS ATKEIRAKGY NLPILALTAH
AMNEEKKTCI DAGMNDFISK PVRAQELKLI LDSLKLG
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