| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1553 |
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| Symbol | uup |
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| ID | 6987193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1663185 |
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| End bp | 1665095 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379885 |
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| Product | ABC transporter ATPase component |
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| Protein accession | YP_002262985 |
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| Protein GI | 209695056 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.318875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAC TTACAATTAA TAATGGTCAA TTAGCGTTTG GTGATCATCC GTTATTAGAC
AAATCAGATT TTGCTCTACA AGAAAATGAA CGCGTATGTT TGGTTGGCCG TAATGGTGCG
GGTAAATCAA CGCTAATGAA AGTAATTGCT GGTGATATCC TTATGGATGA TGGCAAATTA
CAAATTAATC AAGATGTGGT GGTTTCTCGT TTAGAGCAAG ATCCACCGCG TAATGAAACG
GGCAGTGTTT TTGATTATGT ATCTGAAGGC CTCGCAGAAG CCGGTAAATA CTTAAAAGAA
TATCATCATA TCTTAGATTT ATTAGCGACT GATCCAAGCG AATCAAACAT TAATAAACTA
GCGAGAGCAC AAGAGCAGAT TGATAACCTT AATGCATGGC ATTTTGATAC ACGTATTCAA
TCTGTTTTAG AATCTCTAAA ACTTGATGGT GCAATGCTAT TAACCGATTT ATCGGGTGGT
TGGCAACGTA AAGCCGCATT GGCTCGCGCA TTGGTATCTG ACCCAGATGT ATTGCTTCTT
GATGAACCAA CGAACCATTT GGATGTTACA ACGATTGTTT GGCTTGAAAG TTTCTTAAAA
GACTTTAAAG GTTCAATCAT CTTTATTTCT CATGACCGTG CATTCATTCA ATCAATGGCT
ACACGAATTG TGGATTTAGA CCGTGGTAAC TTATCTTCTT ATCCTGGTAA TTATGAAGAG
TACTTACTGG CTAAAGAAGA AGCGCTACGC GTAGAAGCTG ATCAAAATGC ACAATTTGAT
AAAGTGCTAG CTCAGGAAGA AGCTTGGATT CGTGAAGGCG TTAAAGCGCG TCGTACTCGA
AATGAAGGAC GTGTGCGTGC CTTAAAACAA TTACGTCGTG AGCGTTCAGA TCGTCGTGAA
GTTGTGGGTA AAGCGAATAT TCAAGTGGAT GGTGGAAATC GTTCAGGTAA AATTGTATTT
GAAGCCGAGA ACCTTCATTA CTCAATTGAT GGTAAAAACA TTGTTAAGAA CTTCAGCTTC
AATGTTATGC GTGGTGATCG CATTGCCTTA ATTGGTGCTA ATGGTTGTGG TAAGAGTACC
TTGCTTAAAC TGATGCTTGA CCAATTACAG CCAGATGCAG GTAAATTGTA TTGCGGTACA
AAACTTGAAG TGGCATATTT TGACCAATAT CGTGAAGCGT TAGACCCAGA AAAAACGGTT
ATCGATAACT TGGCTGACGG TAAGCAAGAA GTGACAGTGA ATGGCCGTGA GCGTCATGCT
TTGAGCTACT TGCAAGATTT CTTATTCTCT CCAAAACGTG CTCGTCAACC AGTGAAAGCA
TTGTCTGGTG GTGAGAAAAA CCGTTTATTA CTTGCGCGTT TATTCCTTCG TCCAAACAAT
TTATTGATTC TTGATGAACC AACCAATGAT TTAGATATCG AAACATTGGA ACTTTTAGAA
GAATTACTTG CCAACTATGA AGGTACATTA TTATTAGTAA GTCACGATCG TCAGTTCGTA
GATAATACAG TAATGACCAG TTGGATCTTT GAAGGTGAGG GCCAGATCGA AGAATTCGTC
GGTGGCTATC ACGATGCTCA ACGACAACGT GCTAATGTAC AAATAAGCCG TGATGCAATG
GCACCAACAG TAAAAGTGAA AACTGAATCT GTTGCTGCTA AAAGCCCGGT AGTCGAGCAA
GCGAAACCAA AGAAACTGTC TTATAAGTTA CAGCGTGAGC TTGAATTGCT GCCTGAAACA
TTAGAAAGAT TAGAAAACGA AATTACAGAA CTTCAAGAGA AAGTGAACGA CGCAACTTTC
TTCCAACAAG ATCCTAAAAC AACAGAAGCT GTTTTAGAAC GTTTAGCTCA AACAGAGCAA
GAGTTGGAAG TGGCATTCGA GCGTTGGGAA GAACTTGAAG CTCTACAATA G
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| Protein sequence | MALLTINNGQ LAFGDHPLLD KSDFALQENE RVCLVGRNGA GKSTLMKVIA GDILMDDGKL
QINQDVVVSR LEQDPPRNET GSVFDYVSEG LAEAGKYLKE YHHILDLLAT DPSESNINKL
ARAQEQIDNL NAWHFDTRIQ SVLESLKLDG AMLLTDLSGG WQRKAALARA LVSDPDVLLL
DEPTNHLDVT TIVWLESFLK DFKGSIIFIS HDRAFIQSMA TRIVDLDRGN LSSYPGNYEE
YLLAKEEALR VEADQNAQFD KVLAQEEAWI REGVKARRTR NEGRVRALKQ LRRERSDRRE
VVGKANIQVD GGNRSGKIVF EAENLHYSID GKNIVKNFSF NVMRGDRIAL IGANGCGKST
LLKLMLDQLQ PDAGKLYCGT KLEVAYFDQY REALDPEKTV IDNLADGKQE VTVNGRERHA
LSYLQDFLFS PKRARQPVKA LSGGEKNRLL LARLFLRPNN LLILDEPTND LDIETLELLE
ELLANYEGTL LLVSHDRQFV DNTVMTSWIF EGEGQIEEFV GGYHDAQRQR ANVQISRDAM
APTVKVKTES VAAKSPVVEQ AKPKKLSYKL QRELELLPET LERLENEITE LQEKVNDATF
FQQDPKTTEA VLERLAQTEQ ELEVAFERWE ELEALQ
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