Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1551 |
Symbol | rlmL |
ID | 6987191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1660800 |
End bp | 1662956 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379883 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_002262983 |
Protein GI | 209695054 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.728211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAATG CGAGGCAATT TAATAACCAA AAGAATCCCA TGAAAAAATA CTTAGCCATC ACTTCTAAAG GCCTTGAAAA CTTACTTGCA GACGAACTAG TTGCACTTGG TGTTACTGAC CCAAAATTAG TTTATGCAGG GGTTACGTTT GAAGCCCCAA TCGAGGTTGT TTATCGTTGT TGTTTGTGGA GCCGTATTGC TTCACGTTTC ATTCAAATTC TGTCTGAGTT TGATGTTCGT GATGATATGG ATTTGTATCT AGGCGCTTCT GCAATTAATT GGCCTAATTA TTTCACAGCA GATAAAACGT TAGTGGTGGA TTTTAACGGT ACGAACCGTG AGATTCGAAA TAGCCAATAC GGTGCATTGA AAGTAAAAGA TGCAATTGTT GACCGTTTCA CAAAGGCTGA TTTAGAACGT CCGAATATTG ATAAAGCGGA ACCTGATTTA CGTGTACATA TGCGTTTATC TGGCGAGAAA GGGATTCTTG GTTTTGATTT AATCGGTTCA GGCTTACATC AGCGTGGTTA CCGTACTGAA GCAGGTCGTG CACCACTTCG TGAAACATTA GCAGCAGCAC TTGTACTTCG CAGTACATGG GATGAAAGCA AACCGCTATT AGATCCAATG TGTGGTTCAG GTACGTTACT GATTGAAGCT GCACTTATGG CGTGTGAAAT GGCACCTGGT GTGAAACGTG AAAAATGGTG TTTTGAAGCG TTGTCTGATT TTGATCCAGA AGTGTGGACT GAAATTCGTT CAGAAGCTCG AGTTAAGAGT CGCCGTGGCG TTAAGAAAGT CGATACGCAT TTTTACGGTT TTGATCGTGA TTATCGTGTA ATTCAAACGG CTCGCGATAA TGCTCGTCGC GCTGGTGTTG AAGATTTAAT CACATTTGAT GTTGGTGATG CAACTAAGAT TGAACGTCCT GAGGGCTTTG AGAATGGGGT TGTAATTTGT AACCCTCCTT ATGGTGAACG TTTAAGTACT GAACCTGCAC TAATTGCACT ATACAGTGAA TTTGGTCGCC AACTAAAAGA ACAATTTGGT GGCTGTACTG CATCAATCTA TTCAAGTAAT GATGATTTGC TTGCGTGTAT TCGTATGCGT GCAGACAAGC AATTCAAACT GAACAATGGG GCGTTACCTT GTGTTCAGAA AAACTATTCA ATTAGTGAAT CGGCTGAACG TAAAGAAGCG GCAAACATTG AAGTTGCTCC TGAGTTTATG AACCGTCTTA AAAAGAATTT GTCTAAACTT GGCAAATGGG CACGTAAAGA GAAGTTAGAT TGTTACCGTC TTTATGATGC CGATTTACCA GATTACAATG CGGCAATTGA TGTATACAAA GATTACATCA TCATTCAAGA ATATACGGCA CCAAAAGAAA TTTCAGAAGA TAAAGCACGT CGTCGTTTAA CTGACATGAT CCGCGCAACA GTGTTAGTGA CTGGTGTTGA AACCAATAAC GTTATTTTGA AAGTACGTCA AAAGCAGTCA GGCAAAAACC AATATCAAAA GTTAGCAGAA AAATCTCGTT ACTTTGATGT TGAAGAGTAC GGCGTAAAAT TGATTGTTAA TTTACAAGAT TACCTAGATA CGGGGTTATT CTTGGATCAT AAATTAACTC GTAAAATGAT TGGTGATATG GCCGCAGGAA AAGATTTCCT AAACCTATTT GCTTATACCG GCTCTGCGAC TGTTCATGCC GCTTGTGGTG GTGCTAAATC GACAATGACC ATTGATATGT CTCGTACCTA CCTAGAGTGG GCTCAGAAGA ACATGAACAC CAATGATCAA ACAGGAACGC AACATCAGTT CCTACAAGCC GATTGTCTAC AATGGCTACA ACAAGCAGAA GGTGAGTTTG ATTTAATCTT TATTGACCCA CCAACATTCT CTAACTCTAA GCGTATGGAC CAAACGTTTG ATGTTCAACG TGACCACATT ATGTTGCTTG AGAACCTAAA ACGTATGTTA CGTCAAGACG GTACTGTTGT ATTTTCTAAC AATAAACGTA ACTTTAAAAT GGATGAAGAA GCGCTAGATA AAGCGGGTCT TCAAGCTAAG AATATTTCAA AACAAACATT GCCGTTAGAT TTTGCTCGTA ATAAGCATAT TCATAACTGC TGGATTATTA CTCACAAGGA AGACTAG
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Protein sequence | MYNARQFNNQ KNPMKKYLAI TSKGLENLLA DELVALGVTD PKLVYAGVTF EAPIEVVYRC CLWSRIASRF IQILSEFDVR DDMDLYLGAS AINWPNYFTA DKTLVVDFNG TNREIRNSQY GALKVKDAIV DRFTKADLER PNIDKAEPDL RVHMRLSGEK GILGFDLIGS GLHQRGYRTE AGRAPLRETL AAALVLRSTW DESKPLLDPM CGSGTLLIEA ALMACEMAPG VKREKWCFEA LSDFDPEVWT EIRSEARVKS RRGVKKVDTH FYGFDRDYRV IQTARDNARR AGVEDLITFD VGDATKIERP EGFENGVVIC NPPYGERLST EPALIALYSE FGRQLKEQFG GCTASIYSSN DDLLACIRMR ADKQFKLNNG ALPCVQKNYS ISESAERKEA ANIEVAPEFM NRLKKNLSKL GKWARKEKLD CYRLYDADLP DYNAAIDVYK DYIIIQEYTA PKEISEDKAR RRLTDMIRAT VLVTGVETNN VILKVRQKQS GKNQYQKLAE KSRYFDVEEY GVKLIVNLQD YLDTGLFLDH KLTRKMIGDM AAGKDFLNLF AYTGSATVHA ACGGAKSTMT IDMSRTYLEW AQKNMNTNDQ TGTQHQFLQA DCLQWLQQAE GEFDLIFIDP PTFSNSKRMD QTFDVQRDHI MLLENLKRML RQDGTVVFSN NKRNFKMDEE ALDKAGLQAK NISKQTLPLD FARNKHIHNC WIITHKED
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