Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1495 |
Symbol | |
ID | 6987143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1604742 |
End bp | 1605449 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643379833 |
Product | hypothetical protein |
Protein accession | YP_002262933 |
Protein GI | 209695004 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0535918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAT TGATTATTGG CGCTTCTGGA GGCATTGGAC TTTCCATTGT GAAAAGCGCT ATTAAACACT ACCAAAATGC CTCAATTTTA GCCACCTATC ACCACCACAT CGGGTTTTCT CATTTAAATG TGCACTGGAT TAAATTAGAT GTTACTAACG AAAACGAGAT AAAACAGCTT TCCAAAACGG TTCACGATGT AGATATTCTC ATTAATGCCG TAGGATTTCT TCATTCTGAA CAACATAAAC CTGAAAAATC GATAGCGCAG TTTAGTCACG ATTTATTTGA TAAGAACATG AACTTAAATA CATTACCTAG CCTCATGTTA GCTAAGCATT TTGAAGCCGC CCTAAAAGCA TCAACAAATA ATACTTTCTA TGTCGTTCTC TCGGCAAGAA TCGGTAGCAT AAAAGACAAT AACATTGGTG GATGGCTAAG TTATCGCATG TCGAAAGCCG CGTTAAATAT GGCAATAAAA ACAATCAGTA TCGAGTGGAA ACTTAAATTG CCACACTGTT GCGTGATGTT ATTTCACCCA GGAACTACGG ATACCGAATT ATCAAAACCA TTTCAGAAAA ATTTACCAAA AAACCAACTG CAATCGCCTG AATTCACCTC CGAATCACTG TTAACATTAA TCCATCACTC AACACCAAGT GATTCAGGAA GGTTTCGTAG CTTTGATGGC ACAGACATTG AATGGTAA
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Protein sequence | MNILIIGASG GIGLSIVKSA IKHYQNASIL ATYHHHIGFS HLNVHWIKLD VTNENEIKQL SKTVHDVDIL INAVGFLHSE QHKPEKSIAQ FSHDLFDKNM NLNTLPSLML AKHFEAALKA STNNTFYVVL SARIGSIKDN NIGGWLSYRM SKAALNMAIK TISIEWKLKL PHCCVMLFHP GTTDTELSKP FQKNLPKNQL QSPEFTSESL LTLIHHSTPS DSGRFRSFDG TDIEW
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