Gene VSAL_I1485 details

Gene Information

• Locus tag: VSAL_I1485
• ID: 6987134
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1595114
• End bp: 1595812
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643379824
• Product: hypothetical protein
• Protein accession: YP_002262924
• Protein GI: 209694995
• COG category: [S] Function unknown
• COG ID: [COG2258] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0104541
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA ACTATCTTAA TAGAATTTAC CGTGGAAAAG TGGAACATCA TTATGGCTTT 
GATACCGCAA TAAATAAATC TCCAATTGAG AAGAGCTTAT ATCTTTTTCT TGAAGGATTA 
GAAGGTGATC AATGCGCCGA TTCTCACCAC CACGGTGGAG TAGAGCGTGC CTTGCATCAA 
TATCCTTTAG AGCATTATGC TTACTGGAAA GAAAAATATG GGGGTGATAT TCATTGGGGG 
GCTCCTGGAA TGGGTGAGAA CCTGAGCTCA GAAGGAATGA CTGAAGAGAC GGTTTGCTTG 
GGAGATCGCT ACCAATGGGG CGACGCCATT ATAGAAGTTA GCCAACCTCG TTCTCCGTGT 
TTTAAATTGA ATAAACGTTG GGAAGTCGAG AATTTCTCTG TTGATATGCA AGAGATAAGT 
CGTTGTGGTT GGTTATATCG TGTCATTCAA CCGGGAATGG TTAGCGCAGA TGAACCTTTG 
GAATTGATTG AACGAGTTCC TAACGCAATG ACATTACGTG AAGTCTGTGA CGTATTTTTT 
GGTGATCCGC TTAACAACGA GGGTCTGCTT AAGTTAAAAC AACAAAGCAA ACTATCAGGC 
AGTTGGATGA TGAAAGTAAT AGCGCGTATT GAGACAAATG AAGTAGAGAA TTGGAACTTC 
AGATTACTCG GTCATGCTGG TGTTAAAACG ACAAAATAA 

 

Protein sequence

MKKNYLNRIY RGKVEHHYGF DTAINKSPIE KSLYLFLEGL EGDQCADSHH HGGVERALHQ 
YPLEHYAYWK EKYGGDIHWG APGMGENLSS EGMTEETVCL GDRYQWGDAI IEVSQPRSPC 
FKLNKRWEVE NFSVDMQEIS RCGWLYRVIQ PGMVSADEPL ELIERVPNAM TLREVCDVFF 
GDPLNNEGLL KLKQQSKLSG SWMMKVIARI ETNEVENWNF RLLGHAGVKT TK